RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PCDHB11Q9Y5F2 797 aa15.6■□□□□ 0.09
TRAF3-204ENST00000539721 R4GN57 208 aa15.6■□□□□ 0.09
TRAF3-204ENST00000539721 KCNE1BA0A087WTH5 132 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 A0A1B0GTQ1 180 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SDHDO14521 159 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 NOBOXO60393 691 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 WFS1O76024 890 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CHRM5P08912 532 aaPredicted RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CDH1P12830 882 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 VARSP26640 1264 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 EPHA8P29322 1005 aaPredicted RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 HNF4AP41235 474 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 HTR6P50406 440 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 BIRC2Q13490 618 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 HLA-BQ31612 363 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 TRIM61Q5EBN2 209 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CATSPEREQ5SY80 951 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ATG9BQ674R7 924 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 NXNQ6DKJ4 435 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 GRHL2Q6ISB3 625 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 IL27RAQ6UWB1 636 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SCIMPQ6UWF3 145 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SLCO4C1Q6ZQN7 724 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 TMEM26Q6ZUK4 368 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 HOMEZQ8IX15 550 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ARL14Q8N4G2 192 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 PTCD3Q96EY7 689 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 OR52B2Q96RD2 323 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 COL25A1Q9BXS0 654 aaPredicted RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CAPN10Q9HC96 672 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 PFDN4Q9NQP4 134 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SLC6A14Q9UN76 642 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SNX6Q9UNH7 406 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 PTGDR2Q9Y5Y4 395 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ISM1B1AKI9 464 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 MANBAO00462 879 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 DCTN3O75935 186 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 EPN2O95208 641 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 KRT6AP02538 564 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 KRT6BP04259 564 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 LINC00032P0C843 101 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 C1GALT1C1LP0DN25 315 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CD22P20273 847 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 CASP2P42575 452 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 KRT6CP48668 564 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 TUBB3Q13509 450 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ZRSR2Q15696 482 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 TBCCQ15814 346 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ICE2Q659A1 982 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SLC23A3Q6PIS1 610 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ZC3H14Q6PJT7 736 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 OGFOD3Q6PK18 319 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 NXPE4Q6UWF7 544 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 ALYREFQ86V81 257 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SLC25A45Q8N413 288 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 STON2Q8WXE9 905 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 LOXL4Q96JB6 756 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 MAELQ96JY0 434 aaKnown RBP15.59■□□□□ 0.09
TRAF3-204ENST00000539721 EFCAB11Q9BUY7 163 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 GAREM1Q9H706 876 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 SPHK1Q9NYA1 384 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 RAB23Q9ULC3 237 aa15.59■□□□□ 0.09
TRAF3-204ENST00000539721 PCDH15Q96QU1 1955 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 FAM221BA6H8Z2 402 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 BTN3A3O00478 584 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 DFNA5O60443 496 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ULK1O75385 1050 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 PEBP1P30086 187 aaKnown RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 FASLGP48023 281 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 SLBPQ14493 270 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 LSM12Q3MHD2 195 aaKnown RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 SGO1Q5FBB7 561 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 C6orf132Q5T0Z8 1188 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ADGRF3Q8IZF5 1079 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 OR2A1Q8NGT9 310 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 OR10G6Q8NH81 332 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 WDR34Q96EX3 536 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 C3orf30Q96M34 536 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 CCT7Q99832 543 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 CCDC28BQ9BUN5 200 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 EHD1Q9H4M9 534 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ELOVL6Q9H5J4 265 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 PELI2Q9HAT8 420 aa15.58■□□□□ 0.08
TRAF3-204ENST00000539721 CUEDC1Q9NWM3 386 aaPredicted RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ZNF490Q9ULM2 529 aaPredicted RBP15.58■□□□□ 0.08
TRAF3-204ENST00000539721 ATP6AP2A0A1C7CYW4 349 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 PIPSLA2A3N6 862 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 OR6C74A6NCV1 312 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 EBAG9O00559 213 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 YKT6O15498 198 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 PRICKLE3O43900 615 aaPredicted RBP15.57■□□□□ 0.08
TRAF3-204ENST00000539721 ATP6AP2O75787 350 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 CCNDBP1O95273 360 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 MPLP40238 635 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 YBX1P67809 324 aaKnown RBP15.57■□□□□ 0.08
TRAF3-204ENST00000539721 PRDX1Q06830 199 aaKnown RBP15.57■□□□□ 0.08
TRAF3-204ENST00000539721 IFT88Q13099 833 aa15.57■□□□□ 0.08
TRAF3-204ENST00000539721 LAPTM5Q13571 262 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms