RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FAM3CQ92520 227 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 TUBGCP3Q96CW5 907 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 ATG10Q9H0Y0 220 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 GPR34Q9UPC5 381 aa16.58■□□□□ 0.25
PCDHB17P-201ENST00000539533 TBC1D3DA0A087WVF3 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3IA0A087WXS9 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3EA0A087X179 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3KA0A087X1G2 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 PABPN1LA6NDY0 278 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3FA6NER0 549 aaPredicted RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 SAC3D1A6NKF1 404 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3LB9A6J9 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 RNGTTO60942 597 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3HP0C7X1 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 EPB42P16452 691 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 RPL10P27635 214 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 ACADVLP49748 655 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 CCINQ13939 588 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 NFE2L1Q14494 772 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 PTCHD3Q3KNS1 767 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3GQ6DHY5 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3CQ6IPX1 549 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 Q6ZNX1 250 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 Q7L0L9 218 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 CROCCP3Q8IVE0 287 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBC1D3Q8IZP1 549 aaPredicted RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 TP53I13Q8NBR0 393 aaPredicted RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 ROPN1LQ96C74 230 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZNF514Q96K75 400 aaPredicted RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 MRGPRX1Q96LB2 322 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 HBEGFQ99075 208 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 C1QTNF2Q9BXJ5 285 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC17A9Q9BYT1 436 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 FBRSQ9HAH7 460 aa16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZFC3H1O60293 1989 aaKnown RBP16.58■□□□□ 0.24
PCDHB17P-201ENST00000539533 H3BM21 787 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 CHEK2O96017 543 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 EPORP19235 508 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 MAP4P27816 1152 aaKnown RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 BDKRB1P46663 353 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 HTR6P50406 440 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 ATP4BP51164 291 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 SGCGQ13326 291 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 GPR141Q7Z602 305 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 FUNDC1Q8IVP5 155 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 PACRGLQ8N7B6 248 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 OR2T11Q8NH01 316 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 LINC00615Q96LM1 132 aaPredicted RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC32A1Q9H598 525 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 PLGRKTQ9HBL7 147 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 CCM2LQ9NUG4 571 aaPredicted RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 TUBA8Q9NY65 449 aaPredicted RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 NDRG2Q9UN36 371 aaKnown RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 A0A087WXM4 84 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 SH3PXD2BA1X283 911 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 TRIM64CA6NLI5 447 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 LOC730098B7Z3J9 87 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 GNAO1P09471 354 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 PIK3CGP48736 1102 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 HNMTP50135 292 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 AP1S2P56377 157 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 NUP107P57740 925 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 STX1BP61266 288 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 SMAD2Q15796 467 aaKnown RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 METTL2BQ6P1Q9 378 aaKnown RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 FAM83HQ6ZRV2 1179 aaPredicted RBP16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 RETREG3Q86VR2 466 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 CBR4Q8N4T8 237 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 MFSD2AQ8NA29 543 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 TEX101Q9BY14 249 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 FZD3Q9NPG1 666 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 TM7SF3Q9NS93 570 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC23A2Q9UGH3 650 aa16.57■□□□□ 0.24
PCDHB17P-201ENST00000539533 DLGAP1O14490 977 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 WDR47O94967 919 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 HGFP14210 728 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 NDUFV2P19404 249 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 TRIM23P36406 574 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC6A12P48065 614 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ENTPD1P49961 510 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ESRRGP62508 458 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 TBCELQ5QJ74 424 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 NEK5Q6P3R8 708 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 KIAA1324Q6UXG2 1013 aaKnown RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 CLVS1Q8IUQ0 354 aaPredicted RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZNF786Q8N393 782 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 TCAIMQ8N3R3 496 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 OR2L2Q8NH16 312 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ZUFSPQ96AP4 578 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 ISOC1Q96CN7 298 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 CDX2Q99626 313 aaPredicted RBP16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 MYOCQ99972 504 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 WDR26Q9H7D7 661 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 EBF1Q9UH73 591 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 SLC22A14Q9Y267 594 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 C17orf113A0A1B0GUU1 675 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 FFAR3O14843 346 aa16.56■□□□□ 0.24
PCDHB17P-201ENST00000539533 GPR42O15529 346 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms