RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 LUZP4Q9P127 313 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ZC3H7BQ9UGR2 993 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 RELNP78509 3460 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 NBASA2RRP1 2371 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 HYKKA2RU49 373 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SRPX2O60687 465 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PIM1P11309 404 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PGAM1P18669 254 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PNLIPRP1P54315 467 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FBXO42Q6P3S6 717 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 NEK10Q6ZWH5 1172 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 OVCH1Q7RTY7 1134 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 KCNMB4Q86W47 210 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CLEC1AQ8NC01 280 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 INPP5DQ92835 1189 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FKBP10Q96AY3 582 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SMAD5Q99717 465 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FAM167BQ9BTA0 163 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SOX17Q9H6I2 414 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 KLHL42Q9P2K6 505 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CTSFQ9UBX1 484 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 TAC3Q9UHF0 121 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CDC23Q9UJX2 597 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DHRS7Q9Y394 339 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PCDHGB7Q9Y5F8 929 aa18.23■□□□□ 0.51
TNFRSF1A-212ENST00000539372 OR2A25A4D2G3 310 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DNALI1O14645 258 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DPM1O60762 260 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SLC16A8O95907 504 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ONECUT2O95948 504 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MPC1LP0DKB6 136 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ERVK-10P10266 1014 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DHX9Q08211 1270 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PTK6Q13882 451 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CRYMQ14894 314 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ARHGAP19Q14CB8 494 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 NKG7Q16617 165 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FAM214AQ32MH5 1076 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MSS51Q4VC12 460 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CYHR1Q6ZMK1 362 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 LMNTD2Q8IXW0 634 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 RBMXL3Q8N7X1 1067 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CPT1CQ8TCG5 803 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CD200R1Q8TD46 325 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ASB11Q8WXH4 323 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CAPZA3Q96KX2 299 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 NDNQ99608 321 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ZFYVE21Q9BQ24 234 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PLCD4Q9BRC7 762 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 AARSD1Q9BTE6 412 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ENAMQ9NRM1 1142 aa18.22■□□□□ 0.51
TNFRSF1A-212ENST00000539372 IGKV1-8A0A0C4DH67 115 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 H0YGG7 62 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ALOX12BO75342 701 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SORBS2O94875 1100 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ALBP02768 609 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 HSD17B2P37059 387 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CD97P48960 835 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ARF3P61204 181 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 NAA25Q14CX7 972 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 VWA5B1Q5TIE3 1220 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ICE2Q659A1 982 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 JMJD6Q6NYC1 403 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ATCAYQ86WG3 371 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 GALNT16Q8N428 558 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 EFCAB3Q8N7B9 438 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 COL26A1Q96A83 441 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SPSB2Q99619 263 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 WDR54Q9H977 334 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SYNPO2LQ9H987 977 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FBXL4Q9UKA2 621 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 COMMD10Q9Y6G5 202 aa18.21■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ZNF839A8K0R7 811 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 E7ENX8 843 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 AGPSO00116 658 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SMAPO00193 183 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ZBTB14O43829 449 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 VPS26AO75436 327 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 IGHEP01854 428 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 ENO3P13929 434 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 TCP1P17987 556 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 MMP11P24347 488 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 TAP2Q03519 686 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRDX1Q06830 199 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 BBS9Q3SYG4 887 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PRR30Q53SZ7 412 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 HP1BP3Q5SSJ5 553 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 SLC6A19Q695T7 634 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 UBE2R2Q712K3 238 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 PAQR7Q86WK9 346 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 IGDCC3Q8IVU1 814 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 KLHL7Q8IXQ5 586 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 FBXO15Q8NCQ5 510 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 C2CD4AQ8NCU7 369 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 CABS1Q96KC9 395 aa18.2■□□□□ 0.5
TNFRSF1A-212ENST00000539372 C10orf90Q96M02 699 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms