RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 C21orf140B9A014 251 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 MEN1O00255 615 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 ZNF749O43361 778 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 NRP2O60462 931 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 SRPX2O60687 465 aaPredicted RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 ITGB2P05107 769 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 ENO2P09104 434 aaPredicted RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 RAB40ALP0C0E4 278 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 AP1S2P56377 157 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 ABATP80404 500 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 CDKL1Q00532 357 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 LINC00303Q3SY05 128 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 ICE2Q659A1 982 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 SUSD1Q6UWL2 747 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 TAX1BP1Q86VP1 789 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 TMEM126BQ8IUX1 230 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 MYO1HQ8N1T3 1032 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 NKAPQ8N5F7 415 aaKnown RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 OR56A3Q8NH54 315 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 MCOLN3Q8TDD5 553 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 CT55Q8WUE5 264 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 UBL7Q96S82 380 aaPredicted RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 MIPEPQ99797 713 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 DPH2Q9BQC3 489 aaPredicted RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 PLCD4Q9BRC7 762 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 SARGQ9BW04 601 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 GPR87Q9BY21 358 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 FANCEQ9HB96 536 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 INTS7Q9NVH2 962 aaKnown RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 TSR3Q9UJK0 312 aaKnown RBP13.15□□□□□ -0.3
CD9-208ENST00000538834 CROTQ9UKG9 612 aa13.15□□□□□ -0.3
CD9-208ENST00000538834 E7EQ34 232 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 TK2O00142 265 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 HBQ1P09105 142 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 ITGAXP20702 1163 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 CYP2A7P20853 494 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 STX2P32856 288 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 EMP3P54852 163 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 DNASE1L3Q13609 305 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 ZNF460Q14592 562 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 NAA25Q14CX7 972 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 DEFB110Q30KQ9 67 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 ZC3H12BQ5HYM0 836 aaKnown RBP13.14□□□□□ -0.31
CD9-208ENST00000538834 FAM199XQ6PEV8 388 aaPredicted RBP13.14□□□□□ -0.31
CD9-208ENST00000538834 AGTRAPQ6RW13 159 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 FAM198BQ6UWH4 519 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 MBOAT1Q6ZNC8 495 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 CAPN12Q6ZSI9 719 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 CDKL2Q92772 493 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 FBXL8Q96CD0 374 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 DPH7Q9BTV6 452 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 TXLNGYQ9BZA5 131 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 ACTR5Q9H9F9 607 aaPredicted RBP13.14□□□□□ -0.31
CD9-208ENST00000538834 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
CD9-208ENST00000538834 SLC22A11Q9NSA0 550 aa13.14□□□□□ -0.31
CD9-208ENST00000538834 RALYQ9UKM9 306 aaKnown RBP13.14□□□□□ -0.31
CD9-208ENST00000538834 KCNE1BA0A087WTH5 132 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 ZNF891A8MT65 544 aaPredicted RBP13.13□□□□□ -0.31
CD9-208ENST00000538834 NKX2-8O15522 239 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 MAP3K7O43318 606 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 FAM155BO75949 473 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 OR2B3O76000 313 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 FURINP09958 794 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 NPPBP16860 134 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 TCN2P20062 427 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CMPK1P30085 196 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 DLSTP36957 453 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 TCTE1Q5JU00 501 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 YOD1Q5VVQ6 348 aaPredicted RBP13.13□□□□□ -0.31
CD9-208ENST00000538834 FRMPD2BQ6IN97 320 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 LCTLQ6UWM7 567 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CEP128Q6ZU80 1094 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 EIF1ADQ8N9N8 165 aaKnown RBP13.13□□□□□ -0.31
CD9-208ENST00000538834 OR4K1Q8NGD4 311 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 ADAMTS17Q8TE56 1095 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 RNF31Q96EP0 1072 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 OR4K3Q96R72 315 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 NLNQ9BYT8 704 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CHST8Q9H2A9 424 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 CDC42EP4Q9H3Q1 356 aaKnown RBP13.13□□□□□ -0.31
CD9-208ENST00000538834 ACSS3Q9H6R3 686 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 MRPS30Q9NP92 439 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms