RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 DPYSL2Q16555 572 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 KRT74Q7RTS7 529 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
USP3-203ENST00000538686 CNTN4Q8IWV2 1026 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 ATG16L2Q8NAA4 619 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 GPR152Q8TDT2 470 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 C11orf24Q96F05 449 aaPredicted RBP12.11□□□□□ -0.47
USP3-203ENST00000538686 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 VAT1Q99536 393 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 APOL2Q9BQE5 337 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 ASPNQ9BXN1 380 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 MED28Q9H204 178 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 POLE3Q9NRF9 147 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 CTSFQ9UBX1 484 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 INVSQ9Y283 1065 aa12.11□□□□□ -0.47
USP3-203ENST00000538686 A0A1B0GVI7 797 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 WRBO00258 174 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ITGB1P05556 798 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CD19P15391 556 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 POU1F1P28069 291 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 MAPK1P28482 360 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 GPC1P35052 558 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SOX11P35716 441 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 NFKB2Q00653 900 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 FGL1Q08830 312 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 PYDC2Q56P42 97 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SH3PXD2AQ5TCZ1 1133 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ANKRD34AQ69YU3 496 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SLC27A4Q6P1M0 643 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ENPP6Q6UWR7 440 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 KRT77Q7Z794 578 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 GALNT5Q7Z7M9 940 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 TMEM179BQ7Z7N9 219 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 C1orf52Q8N6N3 182 aaKnown RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 DNAAF3Q8N9W5 541 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 OR2T12Q8NG77 320 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SETD7Q8WTS6 366 aaKnown RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 TCEAL3Q969E4 200 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 RHBDF1Q96CC6 855 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 NXPE2Q96DL1 559 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 KCTD15Q96SI1 283 aaPredicted RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 KATNAL1Q9BW62 490 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ABCC13Q9NSE7 274 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 AIG1Q9NVV5 245 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 TJP2Q9UDY2 1190 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 EPHA6Q9UF33 1036 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 EDARQ9UNE0 448 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 DERAQ9Y315 318 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 DNAJC15Q9Y5T4 150 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 TMEM82A0PJX8 343 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 INMT-MINDY4F8WBC2 141 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 AZIN1O14977 448 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CHP2O43745 196 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 AOC2O75106 756 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ARP10275 920 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 IL2RBP14784 551 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 PFKLP17858 780 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 STOMP27105 288 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 RORAP35398 523 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CASP2P42575 452 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 PTGER2P43116 358 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CLCN5P51795 746 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 PSMD4P55036 377 aaKnown RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 ABRQ12979 859 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 GRB7Q14451 532 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 SF3A2Q15428 464 aaKnown RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.1□□□□□ -0.47
USP3-203ENST00000538686 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 KANK2Q63ZY3 851 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CPZQ66K79 652 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 TMEM107Q6UX40 140 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 HSDL2Q6YN16 418 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 FAM92BQ6ZTR7 304 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 BEND4Q6ZU67 534 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 BRINP3Q76B58 766 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 CYP4Z1Q86W10 505 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 DNAJC22Q8N4W6 341 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 MS4A15Q8N5U1 240 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
USP3-203ENST00000538686 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 PIGBQ92521 554 aa12.1□□□□□ -0.47
USP3-203ENST00000538686 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms