RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SUSD1Q6UWL2 747 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 PRRT2Q7Z6L0 340 aaPredicted RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 MROH8Q9H579 483 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 SATB2Q9UPW6 733 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 PLK4O00444 970 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 KIAA0513O60268 411 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 HMGCS1Q01581 520 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 ALFQ53S48 1182 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 CTSL3PQ5NE16 218 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 ZSWIM9Q86XI8 627 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 ZNF683Q8IZ20 524 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 OR4K2Q8NGD2 314 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 SERPINB11Q96P15 392 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 AMBNQ9NP70 447 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 RPS6KA6Q9UK32 745 aa18.08■□□□□ 0.49
SFSWAP-207ENST00000538548 SMIM35A0A1B0GVV1 85 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 VIPP01282 170 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 HOXB9P17482 250 aaPredicted RBP18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 PTPN6P29350 595 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 ITGA1P56199 1179 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 TIMM50Q3ZCQ8 353 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 GPR153Q6NV75 609 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 FAM171BQ6P995 826 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 RNF165Q6ZSG1 346 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 PGBD3Q8N328 593 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 CADM2Q8N3J6 435 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 KCNJ9Q92806 393 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 RTP3Q9BQQ7 232 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 C3orf14Q9HBI5 128 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 LRTM1Q9HBL6 345 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 DYRK4Q9NR20 520 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 ACOXLQ9NUZ1 547 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 WDR70Q9NW82 654 aa18.08■□□□□ 0.48
SFSWAP-207ENST00000538548 AOC2O75106 756 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 PTHP01270 115 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 TNFSF8P32971 234 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 CDKN1CP49918 316 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 SLAMF1Q13291 335 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 Q5BKY6 102 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 SLC7A6Q92536 515 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 TTC9Q92623 222 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 GON7Q9BXV9 100 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 AASDHPPTQ9NRN7 309 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 PCDHB5Q9Y5E4 795 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 LOC105371267A0A1B0GV96 52 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 OR1I1O60431 355 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 C9P02748 559 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 MMP3P08254 477 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 GGT2P36268 569 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 USP39Q53GS9 565 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 ZNF551Q7Z340 670 aaPredicted RBP18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 VTCN1Q7Z7D3 282 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 SERPINA11Q86U17 422 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 CLHC1Q8NHS4 586 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 CRELD1Q96HD1 420 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 EGLN2Q96KS0 407 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 TRNT1Q96Q11 434 aaKnown RBP18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 KCNS3Q9BQ31 491 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 TRIM39Q9HCM9 518 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 GIMAP4Q9NUV9 329 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 SNX8Q9Y5X2 465 aa18.07■□□□□ 0.48
SFSWAP-207ENST00000538548 E5RI56 91 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 FFAR3O14843 346 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 GPR42O15529 346 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 IL7P13232 177 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 NAT1P18440 290 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 CD72P21854 359 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 S100A3P33764 101 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 TTPAP49638 278 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 ZNF235Q14590 738 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 GPAT3Q53EU6 434 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 C10orf62Q5T681 223 aaPredicted RBP18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 TRAF7Q6Q0C0 670 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 TRIM46Q7Z4K8 759 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 SCD5Q86SK9 330 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 ADAMTSL2Q86TH1 951 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 ELMOD2Q8IZ81 293 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 STX19Q8N4C7 294 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 TRIB3Q96RU7 358 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 INPP5KQ9BT40 448 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 TTPALQ9BTX7 342 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 GPR83Q9NYM4 423 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 COMMD10Q9Y6G5 202 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 ULK1O75385 1050 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 STSP08842 583 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 BCKDHAP12694 445 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 PIK3CGP48736 1102 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 GPLD1P80108 840 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 EIF4HQ15056 248 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 PIANPQ8IYJ0 282 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 GALNT6Q8NCL4 622 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 ACBD6Q9BR61 282 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 SARS2Q9NP81 518 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 FARSBQ9NSD9 589 aaKnown RBP18.06■□□□□ 0.48
SFSWAP-207ENST00000538548 STMN3Q9NZ72 180 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms