RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EIF3FO00303 357 aaPredicted RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 CDC7O00311 574 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 EIF3HO15372 352 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPARC-208ENST00000538026 VPS26AO75436 327 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 KATNA1O75449 491 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CREG1O75629 220 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 OR2B3O76000 313 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 ONECUT2O95948 504 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CATP04040 527 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 ITGB2P05107 769 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CYP2A7P20853 494 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PTPN4P29074 926 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 MAGEA4P43358 317 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PRDX1Q06830 199 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 CDC20Q12834 499 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 ERV3-1Q14264 604 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 ARHGAP19Q14CB8 494 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPARC-208ENST00000538026 PPP1R3AQ16821 1122 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 WHAMMP3Q1A5X7 153 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 DEFB109BQ30KR1 87 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 TTLL9Q3SXZ7 439 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 RHBDD2Q6NTF9 364 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 C3orf62Q6ZUJ4 267 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 COX15Q7KZN9 410 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 RNF44Q7L0R7 432 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CTAGE6Q86UF2 777 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PLD3Q8IV08 490 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 SYTL1Q8IYJ3 562 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 AMER2Q8N7J2 671 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 GPATCH11Q8N954 259 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 LSM14AQ8ND56 463 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 SMPDL3AQ92484 453 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 ZNF592Q92610 1267 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 MR1Q95460 341 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 ZUFSPQ96AP4 578 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 LINGO1Q96FE5 620 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PDLIM5Q96HC4 596 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 FOPNLQ96NB1 174 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 OR4K3Q96R72 315 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PLCD4Q9BRC7 762 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 MESP1Q9BRJ9 268 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 DPH7Q9BTV6 452 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CCDC68Q9H2F9 335 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 CAB39LQ9H9S4 337 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 SERTAD3Q9UJW9 196 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 PLCL2Q9UPR0 1127 aa8.05□□□□□ -1.12
SPARC-208ENST00000538026 FARSAQ9Y285 508 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
SPARC-208ENST00000538026 A0A0J9YVX5 310 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 FAM95CA0A1B0GW59 222 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 C21orf140B9A014 251 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 H0YGG7 62 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 TK2O00142 265 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 MASP2O00187 686 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ZSCAN9O15535 394 aaPredicted RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 P2RX6O15547 441 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ZBTB14O43829 449 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 LCMT2O60294 686 aaKnown RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 MT-ND3P03897 115 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 RAB40ALP0C0E4 278 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 CCNYL3P0C7X3 344 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 NPPBP16860 134 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ZNF37AP17032 561 aaPredicted RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 KCNC1P48547 511 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 CSRP3P50461 194 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 EFNA3P52797 238 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ARF3P61204 181 aaPredicted RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 CALCOCO2Q13137 446 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 SLC9A5Q14940 896 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 PRTGQ2VWP7 1150 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 C18orf21Q32NC0 220 aaPredicted RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 KBTBD12Q3ZCT8 623 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ICE2Q659A1 982 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 UGT3A1Q6NUS8 523 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 C16orf46Q6P387 395 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 TTC23LQ6PF05 361 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 VN1R4Q7Z5H5 301 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 SLC26A11Q86WA9 606 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 SPATA6LQ8N4H0 392 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ENDOVQ8N8Q3 282 aaKnown RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 BBOF1Q8ND07 529 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 MAGEC3Q8TD91 643 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 VPS39Q96JC1 886 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 C10orf90Q96M02 699 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 OR2A5Q96R48 311 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 SGPP1Q9BX95 441 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 RAB11FIP5Q9BXF6 653 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 NLNQ9BYT8 704 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 UNKQ9C0B0 810 aaKnown RBP8.04□□□□□ -1.12
SPARC-208ENST00000538026 PHACTR1Q9C0D0 580 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 ATG10Q9H0Y0 220 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
SPARC-208ENST00000538026 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms