RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 XRRA1Q6P2D8 792 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 DLEU7Q6UYE1 221 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 KDELC2Q7Z4H8 507 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 LDB1Q86U70 411 aaPredicted RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 FAM83AQ86UY5 434 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 FAM131BQ86XD5 332 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 BBS7Q8IWZ6 715 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TMEM192Q8IY95 271 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TCEAL8Q8IYN2 117 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 NDRG1Q92597 394 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 WBP1Q96G27 269 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 SENP8Q96LD8 212 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TTPALQ9BTX7 342 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 SLC22A4Q9H015 551 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 EIF2B3Q9NR50 452 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 ASAH2Q9NR71 780 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 KLHL8Q9P2G9 620 aaPredicted RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 SLC6A14Q9UN76 642 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TRAPPC4Q9Y296 219 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TMX2Q9Y320 296 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 DNAH12Q6ZR08 3092 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 PNMA8CA0A1B0GUJ8 204 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 A0A1W2PRG6 482 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 PCDH17O14917 1159 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TULP3O75386 442 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 LYPLA2O95372 231 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 C1QCP02747 245 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 HRGP04196 525 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 GPC1P35052 558 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 MXD1Q05195 221 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 EXOSC2Q13868 293 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 ARMCX4Q5H9R4 360 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 GNASQ5JWF2 1037 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ZNF678Q5SXM1 525 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 SLC35F1Q5T1Q4 408 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 FAM160B1Q5W0V3 765 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ANKRD54Q6NXT1 300 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 CHMP1BQ7LBR1 199 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 PROSER1Q86XN7 944 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ENTHD1Q8IYW4 607 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 STPG2Q8N412 459 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 OR6M1Q8NGM8 313 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 OR10A6Q8NH74 314 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 SETD6Q8TBK2 473 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ZNF675Q8TD23 568 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 OPALINQ96PE5 141 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 TSEN34Q9BSV6 310 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 GTPBP2Q9BX10 602 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 MRPL4Q9BYD3 311 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 NIPAL2Q9H841 368 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 EML4Q9HC35 981 aaKnown RBP10.41□□□□□ -0.74
RTN3-208ENST00000537981 NSMCE4AQ9NXX6 385 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ZNF112Q9UJU3 913 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 ABCG2Q9UNQ0 655 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 A3GALT2U3KPV4 340 aa10.41□□□□□ -0.74
RTN3-208ENST00000537981 UBA6A0AVT1 1052 aaPredicted RBP10.4□□□□□ -0.74
RTN3-208ENST00000537981 ALG1L2C9J202 215 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 NT5C1B-RDH14C9J2C7 533 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 MRPS14O60783 128 aaKnown RBP10.4□□□□□ -0.74
RTN3-208ENST00000537981 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.74
RTN3-208ENST00000537981 GPX5O75715 221 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 OR5F1O95221 314 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 MATN4O95460 622 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 SYPP08247 313 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 BMP8BP34820 402 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 C2orf80Q0P641 193 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 NR6A1Q15406 480 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 SURF1Q15526 300 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 DPYSL2Q16555 572 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 BMP8AQ7Z5Y6 402 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 HIPK1Q86Z02 1210 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 PHACTR4Q8IZ21 702 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 GPR150Q8NGU9 434 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 OR2T11Q8NH01 316 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 DNAJA4Q8WW22 397 aaPredicted RBP10.4□□□□□ -0.74
RTN3-208ENST00000537981 SLC5A11Q8WWX8 675 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 VAPAQ9P0L0 249 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 NLKQ9UBE8 527 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 MAGEL2Q9UJ55 1249 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 KLHL21Q9UJP4 597 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 KCNMB2Q9Y691 235 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 KIAA1217Q5T5P2 1943 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 ANK1P16157 1881 aa10.4□□□□□ -0.74
RTN3-208ENST00000537981 CLRN2A0PK11 232 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 CCL22O00626 93 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 MDM4O15151 490 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 FGF18O76093 207 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 IL33O95760 270 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 AP2A1O95782 977 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 TNNC2P02585 160 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 ITGAMP11215 1152 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 RAC2P15153 192 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 PTPN3P26045 913 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 GNPDA1P46926 289 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 RGS6P49758 472 aa10.4□□□□□ -0.75
RTN3-208ENST00000537981 CLCN4P51793 760 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms