RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 SERTM1A2A2V5 107 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 BTN3A3O00478 584 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 EBAG9O00559 213 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 FFAR3O14843 346 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 PPM1DO15297 605 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 GPR42O15529 346 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 KDM1AO60341 852 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 CRCPO75575 148 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ANXA6P08133 673 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SLC2A4P14672 509 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 VARSP26640 1264 aaKnown RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 HMOX2P30519 316 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SHMT2P34897 504 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 HOXD12P35452 270 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 HNF4AP41235 474 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 PRDX1Q06830 199 aaKnown RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 TSTA3Q13630 321 aaPredicted RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 GPR18Q14330 331 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ABRAXAS2Q15018 415 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ZRSR2Q15696 482 aaKnown RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 CPSF6Q16630 551 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPARC-207ENST00000537849 DUOXA1Q1HG43 343 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 XKR7Q5GH72 579 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 CHSY3Q70JA7 882 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 TRPM8Q7Z2W7 1104 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 TRIM46Q7Z4K8 759 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SLC9B2Q86UD5 537 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 AMIGO1Q86WK6 493 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 TRIM48Q8IWZ4 208 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ARL14Q8N4G2 192 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 RAB42Q8N4Z0 105 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 GPR156Q8NFN8 814 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ABHD11Q8NFV4 315 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 OR4K1Q8NGD4 311 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 CEP70Q8NHQ1 597 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 FLVCR1-AS1Q8TAF5 88 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SLC5A11Q8WWX8 675 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 CCT6BQ92526 530 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 MAGEB10Q96LZ2 347 aaPredicted RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 CCT7Q99832 543 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 AKTIPQ9H8T0 292 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 CAPN10Q9HC96 672 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 TCF7L2Q9NQB0 619 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 SAR1AQ9NR31 198 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 FARSBQ9NSD9 589 aaKnown RBP11.31□□□□□ -0.6
SPARC-207ENST00000537849 POT1Q9NUX5 634 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 OR6C2Q9NZP2 312 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
SPARC-207ENST00000537849 A0A1B0GTQ1 180 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ATP6AP2A0A1C7CYW4 349 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 H0YIV9 168 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 FCHO1O14526 889 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 SDC3O75056 442 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ULK1O75385 1050 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ATP6AP2O75787 350 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 DCTN3O75935 186 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 CHEK2O96017 543 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 PDYNP01213 254 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 KRT6AP02538 564 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 KRT6BP04259 564 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 SERPINA6P08185 405 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 CHRM5P08912 532 aaPredicted RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 PRR35P0CG20 571 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 CDH1P12830 882 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 PSMB5P28074 263 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ARL1P40616 181 aaPredicted RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 KRT6CP48668 564 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 NUBP1P53384 320 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 MAZP56270 477 aaKnown RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 GALNTL6Q49A17 601 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 THEMIS2Q5TEJ8 643 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 IL27RAQ6UWB1 636 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ACAD11Q709F0 780 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 C17orf64Q86WR6 236 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 DDIASQ8IXT1 998 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 RBM12BQ8IXT5 1001 aaKnown RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 CEP76Q8TAP6 659 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 PTCD3Q96EY7 689 aaKnown RBP11.3□□□□□ -0.6
SPARC-207ENST00000537849 LRRC37BQ96QE4 947 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ACAT2Q9BWD1 397 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 SRMSQ9H3Y6 488 aa11.3□□□□□ -0.6
SPARC-207ENST00000537849 ZNF385DQ9H6B1 395 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms