RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CERKQ8TCT0 537 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR51J1Q9H342 316 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CPNE5Q9HCH3 593 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 BPIFA1Q9NP55 256 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 IFT52Q9Y366 437 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CHRNB2P17787 502 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 RTL4Q6ZR62 310 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR8K5Q8NH50 307 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 PCDHB18PQ96TA0 734 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF436Q9C0F3 470 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SGK2Q9HBY8 427 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ANKMY1Q9P2S6 941 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 FETUBQ9UGM5 382 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM233B4DJY2 109 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 PAK4O96013 591 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SFTPBP07988 381 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CTBP2P56545 445 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CREB5Q02930 508 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SEC23AQ15436 765 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR10H5Q8NGA6 315 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 GRIN3AQ8TCU5 1115 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 XAGE5Q8WWM1 108 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TREX2Q9BQ50 279 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 AKTIPQ9H8T0 292 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 C14orf105Q9NVL8 296 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 B3GAT3O94766 335 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ICAM1P05362 532 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ITPKAP23677 461 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ACVR2AP27037 513 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 JAM2P57087 298 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CDC42EP1Q00587 391 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 GTF2H2Q13888 395 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 GTF2H2CQ6P1K8 395 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CPNE8Q86YQ8 564 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ACOT12Q8WYK0 555 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 HTATIP2Q9BUP3 242 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SIAEQ9HAT2 523 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 MGAT4BQ9UQ53 548 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 C14orf166Q9Y224 244 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SNCAIPQ9Y6H5 919 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SULT1B1O43704 296 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CREBL2O60519 120 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CAP2P40123 477 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 MAPK9P45984 424 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SLC18A1P54219 525 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 KCNJ8Q15842 424 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 GPR158Q5T848 1215 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SSX9Q7RTT3 188 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 PLD5Q8N7P1 536 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 RASGEF1AQ8N9B8 481 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 FAM83FQ8NEG4 500 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR4Q3Q8NH05 313 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 LPAR1Q92633 364 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SLC38A4Q969I6 547 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 QRSL1Q9H0R6 528 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR2S2Q9NQN1 319 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 GLTPQ9NZD2 209 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CBY1Q9Y3M2 126 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TULP4Q9NRJ4 1543 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF286BP0CG31 522 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 DSC3Q14574 896 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF460Q14592 562 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 EXOC3L2Q2M3D2 409 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 LYPLAL1Q5VWZ2 237 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SLC26A9Q7LBE3 791 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TMEM126BQ8IUX1 230 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 FIBCD1Q8N539 461 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 STK35Q8TDR2 534 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 CHPT1Q8WUD6 406 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 AP2M1Q96CW1 435 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 DNAJC19Q96DA6 116 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ELMOD3Q96FG2 381 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 COMMD4Q9H0A8 199 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 HSD3B7Q9H2F3 369 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 RETREG1Q9H6L5 497 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 RPS10P5Q9NQ39 176 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 MRPL15Q9P015 296 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF780BQ9Y6R6 833 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SLC1A7O00341 560 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SOCS2O14508 198 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 HBP1O60381 514 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SRPRAP08240 638 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SRSF11Q05519 484 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ST3GAL4Q11206 333 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 PAN2Q504Q3 1202 aaKnown RBP5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ADGRG6Q86SQ4 1221 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 HSH2DQ96JZ2 352 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 LHPPQ9H008 270 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 MTG2Q9H4K7 406 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TPT1P8Q9HAU6 139 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 C3orf14Q9HBI5 128 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF226Q9NYT6 803 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 TNFRSF10DQ9UBN6 386 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 OR12D3Q9UGF7 316 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 UGT2A1Q9Y4X1 527 aa5.54□□□□□ -1.52
CSMD1-215ENST00000537824 SLC33A1O00400 549 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-215ENST00000537824 TOR1AO14656 332 aa5.53□□□□□ -1.52
CSMD1-215ENST00000537824 RNASEH2AO75792 299 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms