RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 CTNNAL1Q9UBT7 734 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 KLHL3Q9UH77 587 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 PDE10AQ9Y233 779 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 ACOT9Q9Y305 439 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
DDB1-207ENST00000535967 A0A0J9YY10 115 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 NPEPPSL1A6NEC2 478 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 ISM1B1AKI9 464 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 ZBTB11O95625 1053 aaPredicted RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 SLC16A8O95907 504 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 SYF2O95926 243 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 ALDOAP04075 364 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 LTA4HP09960 611 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 NUDT17P0C025 328 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 CCDC166P0CW27 439 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 UGT2B7P16662 529 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 CDH3P22223 829 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 MPSTP25325 297 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 RBMS1P29558 406 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 TYK2P29597 1187 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 OAS2P29728 719 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 PRDX3P30048 256 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 PEBP1P30086 187 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 PNLIPRP1P54315 467 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 RASA2Q15283 850 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 PHKG1Q16816 387 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 FRA10AC1Q70Z53 315 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 FBXO39Q8N4B4 442 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 FLVCR1-AS1Q8TAF5 88 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 ATL1Q8WXF7 558 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 SMPDL3AQ92484 453 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 DLG3Q92796 817 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 OR2A14Q96R47 310 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 MAP3K3Q99759 626 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 B3GNT4Q9C0J1 378 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 NMRAL1Q9HBL8 299 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 RRAGDQ9NQL2 400 aaPredicted RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 SPHK1Q9NYA1 384 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 CIDEBQ9UHD4 219 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 TLK1Q9UKI8 766 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 BTRCQ9Y297 605 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 OARD1Q9Y530 152 aa12.22□□□□□ -0.45
DDB1-207ENST00000535967 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
DDB1-207ENST00000535967 IGHV5-51A0A0C4DH38 117 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 A8MU76 341 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 B4E171 279 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 TRIM49D1C9J1S8 452 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 KIF1CO43896 1103 aaKnown RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 PRICKLE3O43900 615 aaPredicted RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 ERLIN1O75477 346 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 TNFSF15O95150 251 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 WISP1O95388 367 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 C2P06681 752 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 JMJD7P0C870 316 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 CD1DP15813 335 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 NELFEP18615 380 aaKnown RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 CCND1P24385 295 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 IMPA1P29218 277 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 TSPAN7P41732 249 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 RAB15P59190 212 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 HSD11B2P80365 405 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 NFKB2Q00653 900 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 CSHL1Q14406 222 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 TSNQ15631 228 aaKnown RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 PRICKLE2Q7Z3G6 844 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 TDRPQ86YL5 185 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 SYTL1Q8IYJ3 562 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 ZNF480Q8WV37 535 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 FBXL8Q96CD0 374 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 NRTNQ99748 197 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 CHRNA10Q9GZZ6 450 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 INTS7Q9NVH2 962 aaKnown RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 ARL15Q9NXU5 204 aa12.21□□□□□ -0.45
DDB1-207ENST00000535967 STOX2Q9P2F5 926 aaPredicted RBP12.21□□□□□ -0.45
DDB1-207ENST00000535967 A0A096LPK6 155 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 KRT87PA6NCN2 255 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 E7ENX8 843 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 CDC7O00311 574 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 CDH16O75309 829 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 CCNDBP1O95273 360 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 MSL3P1P0C860 447 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 COL6A2P12110 1019 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 RPA3P35244 121 aaPredicted RBP12.2□□□□□ -0.46
DDB1-207ENST00000535967 ARL4DP49703 201 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 TAP2Q03519 686 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 TGIF1Q15583 401 aa12.2□□□□□ -0.46
DDB1-207ENST00000535967 FAM83EQ2M2I3 478 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms