RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TRPC4Q9UBN4 977 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RIMKLBQ9ULI2 386 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TTC7AQ9ULT0 858 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KLF2Q9Y5W3 355 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZGRF1Q86YA3 2104 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 IQCF5A8MTL0 148 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PCDH17O14917 1159 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CTSVO60911 334 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GPC4O75487 556 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RASAL1O95294 804 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 IFNB1P01574 187 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 HEXBP07686 556 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PRR35P0CG20 571 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PRF1P14222 555 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 COX6B1P14854 86 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PSMA3P25788 255 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 AOAHP28039 575 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PSMB5P28074 263 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 EMP2P54851 167 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 Q0VFX4 171 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ART3Q13508 389 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TSTA3Q13630 321 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 FRMPD2BQ6IN97 320 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TMEM207Q6UWW9 146 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KIAA1328Q86T90 577 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KRT222Q8N1A0 295 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TXLNBQ8N3L3 684 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LKAAEAR1Q8TD35 194 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RELTQ969Z4 430 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZNF285Q96NJ3 590 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZFYVE21Q9BQ24 234 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TRIM56Q9BRZ2 755 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CHST11Q9NPF2 352 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 UTP6Q9NYH9 597 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PLA2G3Q9NZ20 509 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SLC2A6Q9UGQ3 507 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TEKT2Q9UIF3 430 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-207ENST00000535958 IDSB3KWA1 339 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CCL21O00585 134 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PFDN6O15212 129 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PHF2O75151 1096 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 NDUFS3O75489 264 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 UNC5CO95185 931 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 BMP10O95393 424 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 C1orf105O95561 183 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SERPINA7P05543 415 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 COX6A1P12074 109 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PTGER4P35408 488 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TNFSF10P50591 281 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 DSG2Q14126 1118 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GRB7Q14451 532 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ABHD17BQ5VST6 288 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RPTNQ6XPR3 784 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RIPOR1Q6ZS17 1223 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 DTWD1Q8N5C7 304 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CCDC89Q8N998 374 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PEX13Q92968 403 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RERGQ96A58 199 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MVB12AQ96EY5 273 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ACAT2Q9BWD1 397 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SEC14L3Q9UDX4 400 aa12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GRID2IPA4D2P6 1211 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 BTNL10A8MVZ5 291 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CD3EAPO15446 510 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SLCO2B1O94956 709 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MLYCDO95822 493 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 F10P00742 488 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ESRRAP11474 423 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ICAM2P13598 275 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 STIP1P31948 543 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SOX11P35716 441 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RIPPLY3P57055 190 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ACVR1Q04771 509 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SEMA3AQ14563 771 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ATG9BQ674R7 924 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MRGPRGQ86SM5 289 aa12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LDB1Q86U70 411 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LRRC6Q86X45 466 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms