RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CIDEBQ9UHD4 219 aa9.64□□□□□ -0.87
CLSTN3-203ENST00000534830 SLC39A10Q9ULF5 831 aa9.64□□□□□ -0.87
CLSTN3-203ENST00000534830 MRFAP1Q9Y605 127 aa9.64□□□□□ -0.87
CLSTN3-203ENST00000534830 MYO7BQ6PIF6 2116 aa9.64□□□□□ -0.87
CLSTN3-203ENST00000534830 A0A1B0GTL3 188 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ZCWPW2A0A1B0GU75 182 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FAM237BA0A1B0GVD1 139 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 KRT87PA6NCN2 255 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 H3BMM5 538 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 CTSVO60911 334 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 PSIP1O75475 530 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 KRT14P02533 472 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ALBP02768 609 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ESR1P03372 595 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 MLNP12872 115 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 PSMB5P28074 263 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 CCNFP41002 786 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 MAGEA3P43357 314 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 BDKRB1P46663 353 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 CLCN7P51798 805 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FOXL2P58012 376 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 GPS1Q13098 491 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FASTKQ14296 549 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 SF1Q15637 639 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 TRIP13Q15645 432 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ZC3H12BQ5HYM0 836 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 TCTE1Q5JU00 501 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 DCAF10Q5QP82 559 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 RNF187Q5TA31 235 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FBXO42Q6P3S6 717 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 OVCH1Q7RTY7 1134 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 PPP1R32Q7Z5V6 425 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 SDCCAG8Q86SQ7 713 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 TAX1BP1Q86VP1 789 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 AGGF1Q8N302 714 aaeCLIP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ST6GALNAC3Q8NDV1 305 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 OR2L3Q8NG85 312 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 OR2A1Q8NGT9 310 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 DLG3Q92796 817 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FKBP10Q96AY3 582 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 FER1L6-AS2Q96M78 137 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 NDC1Q9BTX1 674 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 ZNF552Q9H707 407 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 WDR54Q9H977 334 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 AGPAT4Q9NRZ5 378 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 TXLNGQ9NUQ3 528 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 SPATA7Q9P0W8 599 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 NDOR1Q9UHB4 597 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 GPN3Q9UHW5 284 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 RUVBL2Q9Y230 463 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 CRYL1Q9Y2S2 319 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 MED16Q9Y2X0 877 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 PTRH2Q9Y3E5 179 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 JRKLQ9Y4A0 524 aa9.63□□□□□ -0.87
CLSTN3-203ENST00000534830 SPG11Q96JI7 2443 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 A0A1B0GX78 115 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MAGEB16A2A368 324 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 OR2A25A4D2G3 310 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 VSTM2BA6NLU5 285 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 ARHGEF33A8MVX0 844 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MYO1CO00159 1063 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 DSCR3O14972 297 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 NRP2O60462 931 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 SRPX2O60687 465 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MED26O95402 600 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 IGHEP01854 428 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 PKMP14618 531 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MCM3P25205 808 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 OTX2P32243 289 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 PTGER4P35408 488 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 COILP38432 576 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 FOLR3P41439 243 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 YBX1P67809 324 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 SARNPP82979 210 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 NKG7Q16617 165 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 ANKRD20A4Q4UJ75 823 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 ACSBG2Q5FVE4 666 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 CRB2Q5IJ48 1285 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 VWA5B1Q5TIE3 1220 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 NEPROQ6NW34 567 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 TTC23LQ6PF05 361 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 IGFL3Q6UXB1 125 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 TTLL10Q6ZVT0 673 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 NEK10Q6ZWH5 1172 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 RNF44Q7L0R7 432 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 FJX1Q86VR8 437 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 REXO1L1PQ8IX06 675 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 OR9A1PQ8NGU1 263 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MAGEC3Q8TD91 643 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 MS4A14Q96JA4 679 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 PBKQ96KB5 322 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 SIGLEC10Q96LC7 697 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 FOPNLQ96NB1 174 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 SERPINB12Q96P63 405 aa9.62□□□□□ -0.87
CLSTN3-203ENST00000534830 SPSB2Q99619 263 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms