RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CCR3P51677 355 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 C1QTNF8P60827 252 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 PSMC5P62195 406 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RPL10AP62906 217 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SPAG1Q07617 926 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 MED21Q13503 144 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 NAB1Q13506 487 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 COTL1Q14019 142 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 DMC1Q14565 340 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 DUSP7Q16829 419 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 UGP2Q16851 508 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SMU1Q2TAY7 513 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 BTBD16Q32M84 506 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 EDRF1Q3B7T1 1238 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF585BQ52M93 769 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ARL13AQ5H913 290 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TTC22Q5TAA0 569 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 FAM171A1Q5VUB5 890 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 DCAF12L2Q5VW00 463 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RESP18Q5W5W9 173 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TPGS2Q68CL5 300 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF530Q6P9A1 599 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 KLHL17Q6TDP4 642 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZYG11AQ6WRX3 759 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 LRRC74BQ6ZQY2 392 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 Q6ZTK2 550 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 NIPA1Q7RTP0 329 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 HAUS6Q7Z4H7 955 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SLFN11Q7Z7L1 901 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ADGRG6Q86SQ4 1221 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF589Q86UQ0 364 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TMTC1Q8IUR5 882 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TMEM139Q8IV31 216 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ADGRF2Q8IZF7 708 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SLC4A11Q8NBS3 891 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 MGARPQ8TDB4 240 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 CLEC4CQ8WTT0 213 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 UCMAQ8WVF2 138 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 MSANTD3Q96H12 275 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 PRICKLE1Q96MT3 831 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF641Q96N77 438 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RUNDC3BQ96NL0 473 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ZIM3Q96PE6 472 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 FRG2BQ96QU4 278 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 LHX5Q9H2C1 402 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 THAP9Q9H5L6 903 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 XKR8Q9H6D3 395 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TLE6Q9H808 572 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TMEM206Q9H813 350 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RAVER2Q9HCJ3 691 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RRN3Q9NYV6 651 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ANKMY1Q9P2S6 941 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SH3BGRL2Q9UJC5 107 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RCOR1Q9UKL0 485 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ERGIC3Q9Y282 383 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TDRKHQ9Y2W6 561 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ARL2BPQ9Y2Y0 163 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 UTP11Q9Y3A2 253 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 N4BP2Q86UW6 1770 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 USP42Q9H9J4 1324 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RTL9Q8NET4 1388 aa4.15□□□□□ -1.74
ITGB1-219ENST00000534049 TIAM2Q8IVF5 1701 aa4.15□□□□□ -1.74
ITGB1-219ENST00000534049 A0A087WV62 115 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 HEATR9A2RTY3 570 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 A6NCN8 305 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 ARGFXA6NJG6 315 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 LGALS16A8MUM7 142 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 H0Y626 953 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 MS4A18H0YCH9 400 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 TRIM77I1YAP6 450 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 LAD1O00515 517 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 RASGRF2O14827 1237 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 CLOCKO15516 846 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 CCDC22O60826 627 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 ATP2C2O75185 946 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 TGDSO95455 350 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 WDPCPO95876 746 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 AGR2O95994 175 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 APOC1P02654 83 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 MYBL1P10243 752 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 ACTN1P12814 892 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 PKMP14618 531 aaKnown RBP4.15□□□□□ -1.75
ITGB1-219ENST00000534049 MYL6BP14649 208 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 TCEA1P23193 301 aaKnown RBP4.15□□□□□ -1.75
ITGB1-219ENST00000534049 CCNE1P24864 410 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 DNAJB1P25685 340 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 MARK3P27448 753 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 STX2P32856 288 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 TTKP33981 857 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 RFC4P35249 363 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 TALDO1P37837 337 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 HADHAP40939 763 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 HNF4AP41235 474 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 CD86P42081 329 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 PSMD4P55036 377 aaKnown RBP4.15□□□□□ -1.75
ITGB1-219ENST00000534049 NR1H2P55055 460 aa4.15□□□□□ -1.75
ITGB1-219ENST00000534049 HADHBP55084 474 aaKnown RBP4.15□□□□□ -1.75
ITGB1-219ENST00000534049 C21orf59P57076 290 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms