RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PCOLCE2Q9UKZ9 415 aa10.6□□□□□ -0.71
CCDC90B-218ENST00000533761 KCNK6Q9Y257 313 aa10.6□□□□□ -0.71
CCDC90B-218ENST00000533761 CABIN1Q9Y6J0 2220 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ADAMTS9Q9P2N4 1935 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ERICH4A6NGS2 130 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CLGNO14967 610 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TAPBPO15533 448 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PIAS2O75928 621 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CLDN9O95484 217 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 KRT6AP02538 564 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 KRT6BP04259 564 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 SERPINA6P08185 405 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 FURINP09958 794 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZNF883P0CG24 379 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 HGFP14210 728 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 EZRP15311 586 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PCSK2P16519 638 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TGM1P22735 817 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 RPL10P27635 214 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 HMOX2P30519 316 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 BDKRB1P46663 353 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 KRT6CP48668 564 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZNF33BQ06732 778 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 IFT88Q13099 833 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZRSR2Q15696 482 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 GGTA1PQ4G0N0 100 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 AASDHQ4L235 1098 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 KANK2Q63ZY3 851 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CAPRIN2Q6IMN6 1127 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 EPGNQ6UW88 154 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ABRAXAS1Q6UWZ7 409 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PRR23CQ6ZRP0 262 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ASCL5Q7RTU5 278 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 KLHDC8AQ8IYD2 350 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZNF548Q8NEK5 533 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CEP70Q8NHQ1 597 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 METTL6Q8TCB7 284 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 GPBAR1Q8TDU6 330 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZFPM2Q8WW38 1151 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 REPS1Q96D71 796 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 C19orf60Q96EN9 201 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PKP4Q99569 1192 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TMEM79Q9BSE2 394 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 HAUS8Q9BT25 410 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CCDC28BQ9BUN5 200 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 LRRC61Q9BV99 259 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 NUF2Q9BZD4 464 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 SHCBP1LQ9BZQ2 653 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TM7SF3Q9NS93 570 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 IMP3Q9NV31 184 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TRPS1Q9UHF7 1281 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 ZFP69BQ9UJL9 534 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 SNX6Q9UNH7 406 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PSMD13Q9UNM6 376 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TDRKHQ9Y2W6 561 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 DYRK1BQ9Y463 629 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 RIF1Q5UIP0 2472 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 PCDH15Q96QU1 1955 aa10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TDRD6O60522 2096 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-218ENST00000533761 TP53BP1Q12888 1972 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 CCT8L1PA6NM43 557 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SCAMP1O15126 338 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 AQP9O43315 295 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 PCDHGA12O60330 932 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 HNRNPCL1O60812 293 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SDC3O75056 442 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 ATP5HO75947 161 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 MTHFD1P11586 935 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 F3P13726 295 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 IMPA1P29218 277 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 ARRB2P32121 409 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 IDH3AP50213 366 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 RASSF2P50749 326 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 RAB28P51157 221 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 INHBCP55103 352 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SLC14A1Q13336 389 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 PAGE2BQ5JRK9 111 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 THEMIS2Q5TEJ8 643 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 LIPJQ5W064 366 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 NXNQ6DKJ4 435 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 RNF165Q6ZSG1 346 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 MYLK4Q86YV6 388 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TRIM48Q8IWZ4 208 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 RBM12BQ8IXT5 1001 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 OR56A3Q8NH54 315 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 ACTRT2Q8TDY3 377 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 LMX1AQ8TE12 382 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SAP25Q8TEE9 199 aa10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 SETD7Q8WTS6 366 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-218ENST00000533761 TWIST2Q8WVJ9 160 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms