RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 GPR83Q9NYM4 423 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 ZFATQ9P243 1243 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 ERRFI1Q9UJM3 462 aaPredicted RBP8.4□□□□□ -1.06
COPB1-210ENST00000533533 PLAGL1Q9UM63 463 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 PCM1Q15154 2024 aa8.4□□□□□ -1.06
COPB1-210ENST00000533533 PCSK5Q92824 1860 aa8.4□□□□□ -1.07
COPB1-210ENST00000533533 MTORP42345 2549 aa8.4□□□□□ -1.07
COPB1-210ENST00000533533 SLC9B1P1A6NJY1 282 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TMEM150CB9EJG8 249 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TP73O15350 636 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 EIF3HO15372 352 aaKnown RBP eCLIP8.39□□□□□ -1.07
COPB1-210ENST00000533533 KDM1AO60341 852 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 VPS26AO75436 327 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 GPC4O75487 556 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 CBX6O95503 412 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 CLDN1O95832 211 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 LDLRP01130 860 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 RPN2P04844 631 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 MSL3P1P0C860 447 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 CDH3P22223 829 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 SSTR1P30872 391 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 DCTP40126 519 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 MGAT5Q09328 741 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 CUL1Q13616 776 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 NCF4Q15080 339 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 ZNF658BQ4V348 819 aaPredicted RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TEDDM1Q5T9Z0 273 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 FAM198BQ6UWH4 519 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 SYTL1Q8IYJ3 562 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TBC1D21Q8IYX1 336 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 SLC22A15Q8IZD6 547 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 IQCKQ8N0W5 287 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 C2CD4AQ8NCU7 369 aaPredicted RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 OR1L3Q8NH93 324 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 CDKL2Q92772 493 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 SNRNP40Q96DI7 357 aaKnown RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 C19orf60Q96EN9 201 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TCTN2Q96GX1 697 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 GPR21Q99679 349 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 NRTNQ99748 197 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 WDR83Q9BRX9 315 aaKnown RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 ACTR5Q9H9F9 607 aaPredicted RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 SYTL2Q9HCH5 934 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 FAM114A2Q9NRY5 505 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 PCMTD2Q9NV79 361 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 C5AR2Q9P296 337 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TXNDC16Q9P2K2 825 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 GALPQ9UBC7 116 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 POLG2Q9UHN1 485 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 TRMT6Q9UJA5 497 aaKnown RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 POMT2Q9UKY4 750 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 SLC39A10Q9ULF5 831 aa8.39□□□□□ -1.07
COPB1-210ENST00000533533 RUVBL2Q9Y230 463 aaKnown RBP8.39□□□□□ -1.07
COPB1-210ENST00000533533 NUP210LQ5VU65 1888 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 E7ESA3 106 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 MATN2O00339 956 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 PIAS1O75925 651 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 SLCO2B1O94956 709 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 SYF2O95926 243 aaKnown RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 AHSGP02765 367 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 RHOXF2BP0C7M4 288 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 CYP2A7P20853 494 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 MCM3P25205 808 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 ACADLP28330 430 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 MAGEA4P43358 317 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 BDKRB1P46663 353 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 ADARP55265 1226 aaKnown RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 TSTA3Q13630 321 aaPredicted RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 RAPSNQ13702 412 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 NR6A1Q15406 480 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 KLHL38Q2WGJ6 581 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 PTCHD3Q3KNS1 767 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 PLEKHN1Q494U1 663 aaPredicted RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 RBM20Q5T481 1227 aaKnown RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 VWA5B1Q5TIE3 1220 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 STEAP4Q687X5 459 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 UGT3A1Q6NUS8 523 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 ZNF549Q6P9A3 640 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 ZDHHC24Q6UX98 284 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 C3orf62Q6ZUJ4 267 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 STRA8Q7Z7C7 330 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 TAX1BP1Q86VP1 789 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 AMIGO1Q86WK6 493 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 CTAGE3PQ8IX95 158 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 RAB42Q8N4Z0 105 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 OR5K2Q8NHB8 316 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 INPP5DQ92835 1189 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 DPH2Q9BQC3 489 aaPredicted RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 RHOXF2Q9BQY4 288 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 AARSD1Q9BTE6 412 aaKnown RBP8.38□□□□□ -1.07
COPB1-210ENST00000533533 PITPNM3Q9BZ71 974 aa8.38□□□□□ -1.07
COPB1-210ENST00000533533 ASF1BQ9NVP2 202 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms