RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SPRTNQ9H040 489 aaPredicted RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 TAC3Q9UHF0 121 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 NOVA2Q9UNW9 492 aaKnown RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 PCDHGA6Q9Y5G7 932 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 AP1M2Q9Y6Q5 423 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 C21orf140B9A014 251 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 MEN1O00255 615 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 ZSCAN9O15535 394 aaPredicted RBP19.62■□□□□ 0.73
CCS-208ENST00000533244 CCNDBP1O95273 360 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 SPRP35270 261 aaPredicted RBP19.62■□□□□ 0.73
CCS-208ENST00000533244 DLSTP36957 453 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 TBPL1P62380 186 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 ABATP80404 500 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 RHDQ02161 417 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 EFTUD2Q15029 972 aaKnown RBP eCLIP19.62■□□□□ 0.733e-8■■■□□ 15.6
CCS-208ENST00000533244 CRTC2Q53ET0 693 aaPredicted RBP19.62■□□□□ 0.73
CCS-208ENST00000533244 ZNF425Q6IV72 752 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 TLDC1Q6P9B6 456 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 ZSCAN1Q8NBB4 408 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 CT55Q8WUE5 264 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 TSPAN17Q96FV3 270 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 DPH7Q9BTV6 452 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 CDC42EP4Q9H3Q1 356 aaKnown RBP19.62■□□□□ 0.73
CCS-208ENST00000533244 CAB39LQ9H9S4 337 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 GPAMQ9HCL2 828 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 MRPS30Q9NP92 439 aaKnown RBP19.62■□□□□ 0.73
CCS-208ENST00000533244 SEC16AO15027 2179 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 FER1L5A0AVI2 2057 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 HEATR5BQ9P2D3 2071 aa19.62■□□□□ 0.73
CCS-208ENST00000533244 NRP2O60462 931 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 FAM155BO75949 473 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 HBQ1P09105 142 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 HIST1H2AGP0C0S8 130 aaPredicted RBP19.61■□□□□ 0.73
CCS-208ENST00000533244 HIST1H2ADP20671 130 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 DNASE1L3Q13609 305 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 ZXDCQ2QGD7 858 aaPredicted RBP19.61■□□□□ 0.73
CCS-208ENST00000533244 RHBDD2Q6NTF9 364 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 FAM199XQ6PEV8 388 aaPredicted RBP19.61■□□□□ 0.73
CCS-208ENST00000533244 AGTRAPQ6RW13 159 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 PAQR7Q86WK9 346 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 LRRN4CLQ8ND94 238 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 TTC9Q92623 222 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 CLIP3Q96DZ5 547 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 HIST1H2AHQ96KK5 128 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 HIST1H2AJQ99878 128 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 PLCD4Q9BRC7 762 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 H2AFJQ9BTM1 129 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 SGPP1Q9BX95 441 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 FAM117AQ9C073 453 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 CCDC177Q9NQR7 707 aaPredicted RBP19.61■□□□□ 0.73
CCS-208ENST00000533244 RALYQ9UKM9 306 aaKnown RBP19.61■□□□□ 0.73
CCS-208ENST00000533244 ANKRD12Q6UB98 2062 aa19.61■□□□□ 0.73
CCS-208ENST00000533244 ZNF891A8MT65 544 aaPredicted RBP19.6■□□□□ 0.73
CCS-208ENST00000533244 TCN2P20062 427 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 PHBP35232 272 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 SLC12A2P55011 1212 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 RELAQ04206 551 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 TSTA3Q13630 321 aaPredicted RBP19.6■□□□□ 0.73
CCS-208ENST00000533244 USP10Q14694 798 aaKnown RBP19.6■□□□□ 0.73
CCS-208ENST00000533244 STARD8Q92502 1023 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 FBXL8Q96CD0 374 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 UBL7Q96S82 380 aaPredicted RBP19.6■□□□□ 0.73
CCS-208ENST00000533244 DERL2Q9GZP9 239 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 ACSS3Q9H6R3 686 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 KCND3Q9UK17 655 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 SRPK3Q9UPE1 567 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 MRPS18BQ9Y676 258 aaKnown RBP19.6■□□□□ 0.73
CCS-208ENST00000533244 ATMQ13315 3056 aa19.6■□□□□ 0.73
CCS-208ENST00000533244 FITM1A5D6W6 292 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CDC7O00311 574 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 SRPX2O60687 465 aaPredicted RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 KLK3P07288 261 aaPredicted RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 CAPN1P07384 714 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 STMN1P16949 149 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 TCTE1Q5JU00 501 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 PRAMEF13Q5VWM6 474 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 LCN10Q6JVE6 187 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 FBXO42Q6P3S6 717 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 PCSK4Q6UW60 755 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 IFT20Q8IY31 132 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ZNF655Q8N720 491 aaPredicted RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 OR56A3Q8NH54 315 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 MR1Q95460 341 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 RUFY1Q96T51 708 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CYTH2Q99418 400 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ZFYVE21Q9BQ24 234 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 DPH2Q9BQC3 489 aaPredicted RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 SELENOSQ9BQE4 189 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 GPR87Q9BY21 358 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 TRIM54Q9BYV2 358 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 PCBD2Q9H0N5 130 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CHST8Q9H2A9 424 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ARL15Q9NXU5 204 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 NPEPPSL1A6NEC2 478 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 ERVH48-1M5A8F1 160 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 PHGDHO43175 533 aaKnown RBP19.59■□□□□ 0.73
CCS-208ENST00000533244 RECKO95980 971 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CCND1P24385 295 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 RAB10P61026 200 aa19.59■□□□□ 0.73
CCS-208ENST00000533244 CYP4F2P78329 520 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms