RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TTLL10Q6ZVT0 673 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CLEC18CQ8NCF0 446 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 OR2L3Q8NG85 312 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 OR2Y1Q8NGV0 311 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 GSDMBQ8TAX9 411 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 NDC1Q9BTX1 674 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 FBXO6Q9NRD1 293 aaPredicted RBP18.15■□□□□ 0.5
SSH3-209ENST00000532600 ZDHHC18Q9NUE0 388 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 IRAK4Q9NWZ3 460 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 IFT80Q9P2H3 777 aaPredicted RBP18.15■□□□□ 0.5
SSH3-209ENST00000532600 MAD1L1Q9Y6D9 718 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 LRRK2Q5S007 2527 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 LOC105369274A0A096LPK9 316 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 LOC102723532A0A0G2JNH3 316 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 FITM1A5D6W6 292 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 TARM1B6A8C7 271 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 E7ESA3 106 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 MYO1CO00159 1063 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 PSIP1O75475 530 aaKnown RBP18.14■□□□□ 0.49
SSH3-209ENST00000532600 CCNFP41002 786 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 SLC1A2P43004 574 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 PLTPP55058 493 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 CBLBQ13191 982 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 HIF1AQ16665 826 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 KLHL38Q2WGJ6 581 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 TTC23LQ6PF05 361 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 MED25Q71SY5 747 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 RAB43Q86YS6 212 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 OR4N4Q8N0Y3 316 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 TMEM102Q8N9M5 508 aaPredicted RBP18.14■□□□□ 0.49
SSH3-209ENST00000532600 BBOF1Q8ND07 529 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 FBXO25Q8TCJ0 367 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 ZUFSPQ96AP4 578 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 SLC6A20Q9NP91 592 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 TXLNGQ9NUQ3 528 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 INTS10Q9NVR2 710 aaKnown RBP18.14■□□□□ 0.49
SSH3-209ENST00000532600 SPATA7Q9P0W8 599 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 SAMD15Q9P1V8 674 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 PADI2Q9Y2J8 665 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 TEX264Q9Y6I9 313 aa18.14■□□□□ 0.49
SSH3-209ENST00000532600 USP9XQ93008 2570 aaPredicted RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 IGKV1-8A0A0C4DH67 115 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 A0A1B0GX78 115 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 MAGEB16A2A368 324 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 SORBS2O94875 1100 aaKnown RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 FKBP9O95302 570 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 PAMP19021 973 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 ALAS2P22557 587 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 FOLR3P41439 243 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 ELK3P41970 407 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 ARL4CP56559 192 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 MPP1Q00013 466 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 CALCOCO2Q13137 446 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 CUL1Q13616 776 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 RAPSNQ13702 412 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 GLE1Q53GS7 698 aaKnown RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 PDIK1LQ8N165 341 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 Q8NA96 180 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 OR9A1PQ8NGU1 263 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 FOPNLQ96NB1 174 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 PKP4Q99569 1192 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 SMAD5Q99717 465 aaKnown RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 EBNA1BP2Q99848 306 aaKnown RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 C17orf62Q9BQA9 187 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 CUTCQ9NTM9 273 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 INTS7Q9NVH2 962 aaKnown RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 NDOR1Q9UHB4 597 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 GPN3Q9UHW5 284 aaPredicted RBP18.13■□□□□ 0.49
SSH3-209ENST00000532600 NUP210LQ5VU65 1888 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 PCM1Q15154 2024 aa18.13■□□□□ 0.49
SSH3-209ENST00000532600 OR2A25A4D2G3 310 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 DSCR3O14972 297 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 USP1O94782 785 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 ECHS1P30084 290 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 VSX2P58304 361 aaPredicted RBP18.12■□□□□ 0.49
SSH3-209ENST00000532600 TIAL1Q01085 375 aaKnown RBP eCLIP18.12■□□□□ 0.49
SSH3-209ENST00000532600 ZC3H12BQ5HYM0 836 aaKnown RBP18.12■□□□□ 0.49
SSH3-209ENST00000532600 DCAF10Q5QP82 559 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 FBXO42Q6P3S6 717 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 SUSD1Q6UWL2 747 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 CYHR1Q6ZMK1 362 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 RNF44Q7L0R7 432 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 ANKMY2Q8IV38 441 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 METTL27Q8N6F8 245 aaPredicted RBP18.12■□□□□ 0.49
SSH3-209ENST00000532600 RBMXL3Q8N7X1 1067 aaKnown RBP18.12■□□□□ 0.49
SSH3-209ENST00000532600 DLG3Q92796 817 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 SPSB2Q99619 263 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 SELENOSQ9BQE4 189 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 P4HTMQ9NXG6 502 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 STOX2Q9P2F5 926 aaPredicted RBP18.12■□□□□ 0.49
SSH3-209ENST00000532600 CHMP2BQ9UQN3 213 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 SHANK1Q9Y566 2161 aa18.12■□□□□ 0.49
SSH3-209ENST00000532600 A0A0J9YVX5 310 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 PFDN6O15212 129 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 HAUS5O94927 633 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 PGAM1P18669 254 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 OR1D4P47884 311 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 ARSFP54793 590 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 RRADP55042 308 aa18.11■□□□□ 0.49
SSH3-209ENST00000532600 PDIA2Q13087 525 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms