RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TLX3O43711 291 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 B4GALT2O60909 372 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 OMPP47874 163 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 GALK1P51570 392 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SRP54P61011 504 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 TXNRD3NBQ6F5E7 133 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC8B1Q6J4K2 584 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 TRMT10BQ6PF06 316 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 KBTBD2Q8IY47 623 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 OR9A1PQ8NGU1 263 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC13A3Q8WWT9 602 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 MYLIPQ8WY64 445 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC38A4Q969I6 547 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC35G5Q96KT7 338 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 MAGEB17A8MXT2 336 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CER1O95813 267 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 C6P13671 934 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CSNK2A2P19784 350 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SLC7A1P30825 629 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 OGDHQ02218 1023 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 DCST1Q5T197 706 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SLC34A3Q8N130 599 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NXPE3Q969Y0 559 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SHISA4Q96DD7 197 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 LENG8Q96PV6 779 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PHF11Q9UIL8 331 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 ITGB4P16144 1822 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PCDH7O60245 1069 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 OR5F1O95221 314 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TGFB1P01137 390 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 EPOP01588 193 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CD247P20963 164 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TNFRSF4P43489 277 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KHKP50053 298 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 IDH3AP50213 366 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TMPRSS11AQ6ZMR5 421 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PLXDC1Q8IUK5 500 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NXPE1Q8N323 547 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CLDN19Q8N6F1 224 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SCAMP4Q969E2 229 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TLCD1Q96CP7 247 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NUMBLQ9Y6R0 609 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 FOXO6A8MYZ6 492 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TMEM63AO94886 807 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 FECHP22830 423 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CASP9P55211 416 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 RPS14P62263 151 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PYDC2Q56P42 97 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PAOXQ6QHF9 649 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 THOC6Q86W42 341 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KIFC1Q9BW19 673 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SDHAF3Q9NRP4 125 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NLE1Q9NVX2 485 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KAT6AQ92794 2004 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 CDC7O00311 574 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 ADRB3P13945 408 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 HYAL2Q12891 473 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PRKD1Q15139 912 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SNAPC1Q16533 368 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 GPR107Q5VW38 600 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 GALNT5Q7Z7M9 940 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 RANBP3LQ86VV4 465 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NAT8LQ8N9F0 302 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 FAM47BQ8NA70 645 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF527Q8NB42 609 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 FAM13CQ8NE31 585 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KLHL6Q8WZ60 621 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 HBEGFQ99075 208 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 OR6C74A6NCV1 312 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TMCC2O75069 709 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TRAPPC6AO75865 159 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 GPIP06744 558 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NUDT1P36639 197 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 ADARP55265 1226 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 NFKB2Q00653 900 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TRAP1Q12931 704 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SP140Q13342 867 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 HKDC1Q2TB90 917 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PDSS1Q5T2R2 415 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 SLC25A24Q6NUK1 477 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 USP53Q70EK8 1073 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 TCEAL4Q96EI5 215 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 GFM1Q96RP9 751 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 HSD3B7Q9H2F3 369 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KLRF1Q9NZS2 232 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 RSL24D1Q9UHA3 163 aaKnown RBP11.01□□□□□ -0.65
PTPRK-221ENST00000532331 RARRES3Q9UL19 164 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PPM1HQ9ULR3 514 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
PTPRK-221ENST00000532331 KLHL33A6NCF5 533 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 PRAMEF26H0Y7S4 382 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 MAGEB3O15480 346 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 ALOX5P09917 674 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 PTX3P26022 381 aaPredicted RBP11□□□□□ -0.65
PTPRK-221ENST00000532331 CCNIQ14094 377 aa11□□□□□ -0.65
PTPRK-221ENST00000532331 SEMA3AQ14563 771 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms