RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	HIST3H2A	Q7L7L0	130 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	OTOP2	Q7RTS6	562 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM126B	Q8IUX1	230 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CDKL3	Q8IVW4	592 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	DTWD1	Q8N5C7	304 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	KIAA0895	Q8NCT3	520 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	NUDT10	Q8NFP7	164 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	EXD1	Q8NHP7	514 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ZNF461	Q8TAF7	563 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SOCS4	Q8WXH5	440 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CHMP6	Q96FZ7	201 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	NUDT11	Q96G61	164 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	BBS4	Q96RK4	519 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	G6PC3	Q9BUM1	346 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PTDSS2	Q9BVG9	487 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	VN1R3	Q9BXE9	311 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	GEMIN7	Q9H840	131 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TAS2R14	Q9NYV8	317 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ANKFY1	Q9P2R3	1169 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	NCKAP1	Q9Y2A7	1128 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SRPRB	Q9Y5M8	271 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PNPLA7	Q6ZV29	1317 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ADCY9	O60503	1353 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	YEATS2	Q9ULM3	1422 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967		A0A1W2PQJ5	194 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	STRN	O43815	780 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TRIM13	O60858	407 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MMP10	P09238	476 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PNMT	P11086	282 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	DGKQ	P52824	942 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CACNA2D1	P54289	1103 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ROR2	Q01974	943 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CSTF1	Q05048	431 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	NCBP1	Q09161	790 aa	Known RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MERTK	Q12866	999 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	DMC1	Q14565	340 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CARTPT	Q16568	116 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PLCXD3	Q63HM9	321 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SLC25A25	Q6KCM7	469 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM108	Q6UXF1	575 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ARHGAP22	Q7Z5H3	698 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	LINC00523	Q86TU6	105 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ASPG	Q86U10	573 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	FAM47B	Q8NA70	645 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CPA5	Q8WXQ8	436 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MS4A10	Q96PG2	267 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	FAM110A	Q9BQ89	295 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ATG101	Q9BSB4	218 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TKTL2	Q9H0I9	626 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CALHM2	Q9HA72	323 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ENTPD7	Q9NQZ7	604 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MAN2C1	Q9NTJ4	1040 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SMARCAL1	Q9NZC9	954 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	AMFR	Q9UKV5	643 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	UTY	O14607	1347 aa		5.06	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CARMIL2	Q6F5E8	1435 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ITSN2	Q9NZM3	1697 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM120B	A0PK00	339 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MEX3A	A1L020	520 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM191C	A6NGB0	347 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ANKRD30BL	A7E2S9	258 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	GOLGA8M	H3BSY2	632 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TRAPPC3	O43617	180 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CHMP2A	O43633	222 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	KIAA0556	O60303	1618 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	OR4F21	O95013	312 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	GAS8	O95995	478 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ANKRD34C	P0C6C1	535 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM191B	P0C7N4	346 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SLC2A4	P14672	509 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ACO1	P21399	889 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	UGT1A1	P22309	533 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	EPHB2	P29323	1055 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PRKAR2B	P31323	418 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	FDFT1	P37268	417 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	KIR2DL3	P43628	341 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	NPBWR1	P48145	328 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	DAOA	P59103	153 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	RAP2B	P61225	183 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	MC2R	Q01718	297 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SHB	Q15464	509 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	EXOC3L2	Q2M3D2	409 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	ADPRM	Q3LIE5	342 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PCID2	Q5JVF3	399 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TTC23	Q5W5X9	447 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SEL1L3	Q68CR1	1132 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	FOXR2	Q6PJQ5	311 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	CXXC5	Q7LFL8	322 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	LUZP2	Q86TE4	346 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	PAQR7	Q86WK9	346 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	TMEM173	Q86WV6	379 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	C1orf87	Q8N0U7	546 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	OR4K14	Q8NGD5	310 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	OR13F1	Q8NGS4	319 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	GLYATL2	Q8WU03	294 aa		5.05	□□□□□ -1.6
ECHDC1-222	ENST00000531967	SCFD1	Q8WVM8	642 aa		5.05	□□□□□ -1.6

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