RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 TMTC1Q8IUR5 882 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 PIANPQ8IYJ0 282 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 LMNTD1Q8N9Z9 388 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 OR2L8Q8NGY9 312 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 LILRB4Q8NHJ6 448 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 ELMO1Q92556 727 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 MVB12AQ96EY5 273 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 C10orf90Q96M02 699 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 SIGLEC12Q96PQ1 595 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 APOL2Q9BQE5 337 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 ZNF559Q9BR84 538 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 TUBB6Q9BUF5 446 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 HES7Q9BYE0 225 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 GBA3Q9H227 469 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 ZC3H7BQ9UGR2 993 aaKnown RBP7.4□□□□□ -1.22
NXF1-212ENST00000531872 RSPH14Q9UHP6 348 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 TRHDEQ9UKU6 1024 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 PPT2Q9UMR5 302 aa7.4□□□□□ -1.22
NXF1-212ENST00000531872 LOC105369274A0A096LPK9 316 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 LOC102723532A0A0G2JNH3 316 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 CST8O60676 142 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 ANXA9O76027 345 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 FTH1P02794 183 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 KRT1P04264 644 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 HEXBP07686 556 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 HOXD4P09016 255 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 EEF1DP29692 281 aaKnown RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 CD96P40200 585 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 SLC26A3P40879 764 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 CDKN2BP42772 138 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 HSF1Q00613 529 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 LTBQ06643 244 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 TFDP2Q14188 446 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 ITIH4Q14624 930 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 MESDQ14696 234 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 SF1Q15637 639 aaKnown RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 STX1AQ16623 288 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 PRTGQ2VWP7 1150 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 FILIP1LQ4L180 1135 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 DNAJC21Q5F1R6 531 aaKnown RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 ACER2Q5QJU3 275 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 DENND5AQ6IQ26 1287 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 SASS6Q6UVJ0 657 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 PACS1Q6VY07 963 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 NAPRTQ6XQN6 538 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 RNF44Q7L0R7 432 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 TAX1BP1Q86VP1 789 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 OR4N4Q8N0Y3 316 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 BEST3Q8N1M1 668 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 MARVELD2Q8N4S9 558 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 C2orf73Q8N5S3 287 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 AMER3Q8N944 861 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 TMEM178AQ8NBL3 297 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 ASB5Q8WWX0 329 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 CTNNBL1Q8WYA6 563 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 HDAC10Q969S8 669 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 DNAJC1Q96KC8 554 aaKnown RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 ZNF354BQ96LW1 612 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 IL17FQ96PD4 163 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 QKIQ96PU8 341 aaKnown RBP eCLIP7.39□□□□□ -1.23
NXF1-212ENST00000531872 NPAS2Q99743 824 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 PACSIN1Q9BY11 444 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 ARNT2Q9HBZ2 717 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 MKKSQ9NPJ1 570 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 SMARCAL1Q9NZC9 954 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 STOX2Q9P2F5 926 aaPredicted RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 TRPC4Q9UBN4 977 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 ST6GALNAC2Q9UJ37 374 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 CDC14AQ9UNH5 594 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 LUC7L2Q9Y383 392 aaKnown RBP7.39□□□□□ -1.23
NXF1-212ENST00000531872 FAM169AQ9Y6X4 670 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 SCN2AQ99250 2005 aa7.39□□□□□ -1.23
NXF1-212ENST00000531872 JMJD1CQ15652 2540 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 A0A0J9YVX5 310 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 NKX2-6A6NCS4 301 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 A8MUI8 341 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 HACD1B0YJ81 288 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 RASGRF2O14827 1237 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 FFAR3O14843 346 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 GPR42O15529 346 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 PRPF4O43172 522 aaKnown RBP eCLIP7.38□□□□□ -1.231e-8■□□□□ 8.9
NXF1-212ENST00000531872 NRP2O60462 931 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 GPC4O75487 556 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 CD46P15529 392 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 CHRNB4P30926 498 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 NR1I3Q14994 352 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 OR1C1Q15619 314 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 SYTL3Q4VX76 610 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 PLAG1Q6DJT9 500 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 SPINK14Q6IE38 97 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 FBXO42Q6P3S6 717 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 TAS2R42Q7RTR8 314 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 GALNTL5Q7Z4T8 443 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 BIVMQ86UB2 503 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms