RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 C12orf65Q9H3J6 166 aaKnown RBP7.09□□□□□ -1.27
CTNND1-229ENST00000531014 LRRN3Q9H3W5 708 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 C17orf75Q9HAS0 396 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 PAQR5Q9NXK6 330 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-229ENST00000531014 TVP23BQ9NYZ1 205 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 CALML5Q9NZT1 146 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 MYOM1P52179 1685 aa7.09□□□□□ -1.27
CTNND1-229ENST00000531014 E9PI62 339 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 SHOXO15266 292 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 EDF1O60869 148 aaKnown RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 KERAO60938 352 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 HLA-DPB1P04440 258 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CYP11B2P19099 503 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TTPAP49638 278 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CDH12P55289 794 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RAB10P61026 200 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 DUSP4Q13115 394 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 DPYSL3Q14195 570 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ABRAXAS2Q15018 415 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 SYT16Q17RD7 645 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 PRAMEF19Q5SWL8 479 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 NUP54Q7Z3B4 507 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 OR52J3Q8NH60 311 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CPT1CQ8TCG5 803 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 XAGE5Q8WWM1 108 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF419Q96HQ0 510 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CEP41Q9BYV8 373 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ACTR6Q9GZN1 396 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TFB2MQ9H5Q4 396 aaKnown RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 UFSP2Q9NUQ7 469 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 GPRC5BQ9NZH0 403 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TLR6Q9Y2C9 796 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CLUHO75153 1309 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 J3QRK9 145 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 GRID2O43424 1007 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RAB36O95755 333 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 COL6A1P12109 1028 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CTSEP14091 401 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 BMP6P22004 513 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 MPIP34949 423 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RHBDL3P58872 404 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CPSF6Q16630 551 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF423Q2M1K9 1284 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF404Q494X3 552 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 LYPLAL1Q5VWZ2 237 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 POMZP3Q6PJE2 187 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 DPY19L3Q6ZPD9 716 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 BEST4Q8NFU0 473 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 OR5T2Q8NGG2 359 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 JPH3Q8WXH2 748 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RIT1Q92963 219 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 GTPBP3Q969Y2 492 aaKnown RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ACDQ96AP0 544 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 FBXL8Q96CD0 374 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CXorf40BQ96DE9 158 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 BORCS8Q96FH0 119 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ASPNQ9BXN1 380 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ITPAQ9BY32 194 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 PRDM12Q9H4Q4 367 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 NANSQ9NR45 359 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 FBXO6Q9NRD1 293 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 AGPAT3Q9NRZ7 376 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF358Q9NW07 568 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CMAHPQ9Y471 501 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 C5P01031 1676 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 FADS1O60427 444 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ATP6AP2O75787 350 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 SLITRK5O94991 958 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 PIGRP01833 764 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 HMGN1P05114 100 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 RARAP10276 462 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 PCSK2P16519 638 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 OR1E1P30953 314 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CCR10P46092 362 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 THOP1P52888 689 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CAPZA1P52907 286 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ERVK-8P63133 956 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 GRIK2Q13002 908 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TBC1D25Q3MII6 688 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 UNC5AQ6ZN44 842 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 IQCF1Q8N6M8 205 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 LENG9Q96B70 501 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 CERS2Q96G23 380 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 BORCS6Q96GS4 357 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 GAD1Q99259 594 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 POLR1EQ9GZS1 481 aaKnown RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TPT1P8Q9HAU6 139 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 PIH1D1Q9NWS0 290 aaKnown RBP7.08□□□□□ -1.28
CTNND1-229ENST00000531014 ICKQ9UPZ9 632 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 USP20Q9Y2K6 914 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 NRAPQ86VF7 1730 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CTNND1-229ENST00000531014 A8MV72 311 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms