RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 CCR10P46092 362 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 ERVK11-1P61568 191 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 PPARDQ03181 441 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 RBPJQ06330 500 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 CAMK2DQ13557 499 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 PSMD6Q15008 389 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 FCN2Q15485 313 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 C20orf194Q5TEA3 1177 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 KRT80Q6KB66 452 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 PSRC1Q6PGN9 363 aaPredicted RBP3.82□□□□□ -1.8
SOX6-212ENST00000529469 TMEM207Q6UWW9 146 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 LACC1Q8IV20 430 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 MARVELD2Q8N4S9 558 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 OR4K1Q8NGD4 311 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 OR10Q1Q8NGQ4 319 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 VANGL1Q8TAA9 524 aaPredicted RBP3.82□□□□□ -1.8
SOX6-212ENST00000529469 RSPH1Q8WYR4 309 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 VPS33AQ96AX1 596 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 SPSB1Q96BD6 273 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 RMDN1Q96DB5 314 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 ZNF558Q96NG5 402 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 LRRC3BQ96PB8 259 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 SLC2A11Q9BYW1 496 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 FAM129AQ9BZQ8 928 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 RABEP2Q9H5N1 569 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 TLE6Q9H808 572 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 CCDC177Q9NQR7 707 aaPredicted RBP3.82□□□□□ -1.8
SOX6-212ENST00000529469 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 CGNQ9P2M7 1197 aaKnown RBP3.82□□□□□ -1.8
SOX6-212ENST00000529469 GRID1Q9ULK0 1009 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 PPP2R2CQ9Y2T4 447 aa3.82□□□□□ -1.8
SOX6-212ENST00000529469 ARID2Q68CP9 1835 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CCDC180Q9P1Z9 1646 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 ZCCHC6Q5VYS8 1495 aaKnown RBP3.81□□□□□ -1.8
SOX6-212ENST00000529469 AP5Z1O43299 807 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CGAP01215 116 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 FYNP06241 537 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CCDC172P0C7W6 258 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 ZNF883P0CG24 379 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 IRF2P14316 349 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CEBPBP17676 345 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CSTF2P33240 577 aaKnown RBP eCLIP3.81□□□□□ -1.8
SOX6-212ENST00000529469 BMXP51813 675 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 LIMK1P53667 647 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 RAD23AP54725 363 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 HERV-K104P61576 105 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 TEAD2Q15562 447 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 NPTX1Q15818 432 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 XKR6Q5GH73 641 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 SLC35D3Q5M8T2 416 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 ZC2HC1BQ5TFG8 222 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 BTN2A1Q7KYR7 527 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 TLK2Q86UE8 772 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 VSIG1Q86XK7 387 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 LGI2Q8N0V4 545 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 ANKRD13CQ8N6S4 541 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 KLHDC1Q8N7A1 406 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 OR5AP2Q8NGF4 316 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 OR13C3Q8NGS6 347 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 MRGPRDQ8TDS7 321 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 WBP2Q969T9 261 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CNDP2Q96KP4 475 aaKnown RBP3.81□□□□□ -1.8
SOX6-212ENST00000529469 CFAP53Q96M91 514 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 GFRA4Q9GZZ7 299 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 THAP2Q9H0W7 228 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 P2RY12Q9H244 342 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 DNAJC4Q9NNZ3 241 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 KLHL8Q9P2G9 620 aaPredicted RBP3.81□□□□□ -1.8
SOX6-212ENST00000529469 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 CCL27Q9Y4X3 112 aa3.81□□□□□ -1.8
SOX6-212ENST00000529469 SYNRGQ9UMZ2 1314 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 ZNF195O14628 629 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 FPGTO14772 594 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 HMMRO75330 724 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 ZFAND5O76080 213 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 HSPA4LO95757 839 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 ZNF853P0CG23 659 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 SAGP10523 405 aaPredicted RBP3.8□□□□□ -1.8
SOX6-212ENST00000529469 VDRP11473 427 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 EPCAMP16422 314 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 EEF1DP29692 281 aaKnown RBP3.8□□□□□ -1.8
SOX6-212ENST00000529469 CASQ1P31415 396 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 PEX19P40855 299 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 SLC6A12P48065 614 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 LBX1P52954 281 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 CLDN15P56746 228 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 UBASH3AP57075 661 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 COG2Q14746 738 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 TNIP1Q15025 636 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 CDC37Q16543 378 aaPredicted RBP3.8□□□□□ -1.8
SOX6-212ENST00000529469 PHKG1Q16816 387 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 TCP11X2Q5H9J9 407 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 HECTD3Q5T447 861 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 UGT3A1Q6NUS8 523 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 ZNF497Q6ZNH5 498 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 IL17RELQ6ZVW7 336 aa3.8□□□□□ -1.8
SOX6-212ENST00000529469 RAB42Q8N4Z0 105 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms