RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SATB2Q9UPW6 733 aa7.5□□□□□ -1.21
SOX6-211ENST00000528429 SLC22A14Q9Y267 594 aa7.5□□□□□ -1.21
SOX6-211ENST00000528429 RNF11Q9Y3C5 154 aa7.5□□□□□ -1.21
SOX6-211ENST00000528429 PCYT1BQ9Y5K3 369 aaPredicted RBP7.5□□□□□ -1.21
SOX6-211ENST00000528429 PLXNA2O75051 1894 aa7.5□□□□□ -1.21
SOX6-211ENST00000528429 SLC5A10A0PJK1 596 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 DPPA5A6NC42 116 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 LOC730098B7Z3J9 87 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 GFYI3L273 518 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CFLARO15519 480 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 AP1G1O43747 822 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 PDE5AO76074 875 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CATP04040 527 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 ENO2P09104 434 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 GSTM1P09488 218 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ACADMP11310 421 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 LBPP18428 481 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 HSD3B2P26439 372 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CD97P48960 835 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 DIO3P55073 304 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 POLE2P56282 527 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CDK3Q00526 305 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 FGL2Q14314 439 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 SQLEQ14534 574 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 NR6A1Q15406 480 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 TCEA2Q15560 299 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ZXDCQ2QGD7 858 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 MMEL1Q495T6 779 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 ARHGAP24Q8N264 748 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CPSF7Q8N684 471 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 LMNTD1Q8N9Z9 388 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 OR2T11Q8NH01 316 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CMTM3Q96MX0 182 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 NPAS2Q99743 824 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CIB1Q99828 191 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 GABRG3Q99928 467 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 SLC32A1Q9H598 525 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 C8orf33Q9H7E9 229 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 TM7SF3Q9NS93 570 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 MAP3K13O43283 966 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 LATO43561 262 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ENTPD5O75356 428 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 MATN4O95460 622 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 OXSR1O95747 527 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 SLC16A8O95907 504 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CPOXP36551 454 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ADPRHP54922 357 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 TPD52P55327 224 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 AP1S2P56377 157 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 POLR2GP62487 172 aaKnown RBP eCLIP7.49□□□□□ -1.21
SOX6-211ENST00000528429 RPS21P63220 83 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 NAE1Q13564 534 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ABRAXAS2Q15018 415 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 PAOXQ6QHF9 649 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 Q7L0L9 218 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 EFL1Q7Z2Z2 1120 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 MAMDC2Q7Z304 686 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 ZNF554Q86TJ5 538 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 HID1Q8IV36 788 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ULK2Q8IYT8 1036 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 FNDC5Q8NAU1 212 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 RP9Q8TA86 221 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 FAM3CQ92520 227 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 BRINP2Q9C0B6 783 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 ADNPQ9H2P0 1102 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 OSGEPL1Q9H4B0 414 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 DENND2DQ9H6A0 471 aaPredicted RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 CRLF2Q9HC73 371 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 RIC8BQ9NVN3 520 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 MALT1Q9UDY8 824 aa7.49□□□□□ -1.21
SOX6-211ENST00000528429 CFAP20Q9Y6A4 193 aaKnown RBP7.49□□□□□ -1.21
SOX6-211ENST00000528429 TCRBV21S2A2A0A5A6 115 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ARHGAP10A1A4S6 786 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 NR5A2O00482 541 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 VEGFDO43915 354 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 LILRB5O75023 590 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ITGAXP20702 1163 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 ATP6V1E1P36543 226 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PPP2CBP62714 309 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PPP2CAP67775 309 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 HMGCS1Q01581 520 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ART3Q13508 389 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 KPNB1Q14974 876 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 BCL7AQ4VC05 210 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ATP6AP1LQ52LC2 224 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 DUS1LQ6P1R4 473 aaKnown RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 LAYNQ6UX15 382 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 TMEM92Q6UXU6 159 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 ADAMTSL4Q6UY14 1074 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 PRR23CQ6ZRP0 262 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 FAM83HQ6ZRV2 1179 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 RFPL4BQ6ZWI9 263 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 CHSY3Q70JA7 882 aa7.48□□□□□ -1.21
SOX6-211ENST00000528429 CHST15Q7LFX5 561 aaPredicted RBP7.48□□□□□ -1.21
SOX6-211ENST00000528429 AMZ2Q86W34 360 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms