RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DDX43Q9NXZ2 648 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 RAI14Q9P0K7 980 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TAAR2Q9P1P5 351 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 APPL1Q9UKG1 709 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 EXOC7Q9UPT5 735 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TMEM184BQ9Y519 407 aaPredicted RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 TRPV2Q9Y5S1 764 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 POMT1Q9Y6A1 747 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 MSH6P52701 1360 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 EIF3AQ14152 1382 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 PLEKHH1Q9ULM0 1364 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 LRRC72A6NJI9 287 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 PLK4O00444 970 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 CTDSP2O14595 271 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 BCAS2O75934 225 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 RECQL5O94762 991 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 BMP10O95393 424 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 GH2P01242 217 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 TUBBP07437 444 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SELLP14151 372 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 GM2AP17900 193 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 CCNA2P20248 432 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SAT1P21673 171 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 CPT2P23786 658 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 MARK3P27448 753 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 LMAN1P49257 510 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 NT5C2P49902 561 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 LUMP51884 338 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 GMFBP60983 142 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 PITX1P78337 314 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 CCNA1P78396 465 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 MAJINQ3KP22 176 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 C12orf60Q5U649 245 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 ZNF534Q76KX8 674 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SMIM29Q86T20 159 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 PEX5LQ8IYB4 626 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 LMNTD1Q8N9Z9 388 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 POC5Q8NA72 575 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 ZBTB8BQ8NAP8 495 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 SLC24A4Q8NFF2 622 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SETD6Q8TBK2 473 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SLC5A11Q8WWX8 675 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 MLPHQ9BV36 600 aaPredicted RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 KRT23Q9C075 422 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SDF2L1Q9HCN8 221 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 PFDN4Q9NQP4 134 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 MBNL1Q9NR56 388 aaKnown RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 ZFP57Q9NU63 452 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 RCC2Q9P258 522 aaKnown RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 TUBE1Q9UJT0 475 aa5.5□□□□□ -1.53
PCF11-202ENST00000528336 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.5□□□□□ -1.53
PCF11-202ENST00000528336 ANKRD66B4E2M5 251 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 ZNF263O14978 683 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 FGF17O60258 216 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 TOM1O60784 492 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 MITFO75030 526 aaPredicted RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 RSL1D1O76021 490 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 WISP2O76076 250 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 SIX3O95343 332 aaPredicted RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 MMP9P14780 707 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 CCNCP24863 283 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 TMOD1P28289 359 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 NMBRP28336 390 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 AHRP35869 848 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 SLC15A1P46059 708 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 KCNJ10P78508 379 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 GBE1Q04446 702 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 BAATQ14032 418 aaPredicted RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 ACCSLQ4AC99 568 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 TPGS2Q68CL5 300 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 RGS9BPQ6ZS82 235 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 MSANTD1Q6ZTZ1 278 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 SLC26A9Q7LBE3 791 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 AACSQ86V21 672 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 MNS1Q8NEH6 495 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 LRRC8CQ8TDW0 803 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 CCDC114Q96M63 670 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 NAA11Q9BSU3 229 aaPredicted RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 TUBB2BQ9BVA1 445 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 POLE3Q9NRF9 147 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 ARHGEF38Q9NXL2 777 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 ZMAT5Q9UDW3 170 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 SEC63Q9UGP8 760 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 ANAPC2Q9UJX6 822 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 CPSF3Q9UKF6 684 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 EXO1Q9UQ84 846 aaKnown RBP5.49□□□□□ -1.53
PCF11-202ENST00000528336 AURKCQ9UQB9 309 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 PCDHGA1Q9Y5H4 931 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 CDC42BPGQ6DT37 1551 aa5.49□□□□□ -1.53
PCF11-202ENST00000528336 CENPJQ9HC77 1338 aaPredicted RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 XIRP1Q702N8 1843 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 ADGRB2O60241 1585 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 USP47Q96K76 1375 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 hCG_1809904A0A1W2PP81 198 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 A0A1W2PPE2 198 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 A0A1W2PR64 198 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 A0A1W2PR77 199 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms