RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 WDR81Q562E7 1941 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 MATN3O15232 486 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 NDUFS3O75489 264 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 HOXA9P31269 272 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 HCAR3P49019 387 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 HYAL2Q12891 473 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 SLC14A2Q15849 920 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 ZNF284Q2VY69 593 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 LIX1Q8N485 282 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 MCCC1Q96RQ3 725 aaPredicted RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 GPR21Q99679 349 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 B3GNT2Q9NY97 397 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 NLKQ9UBE8 527 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 PCTPQ9UKL6 214 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 SCN1AP35498 2009 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 AKAP5P24588 427 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 RPS19P39019 145 aaKnown RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 ERVPABLB-1P60509 514 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 DSC2Q02487 901 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 DSC3Q14574 896 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 WSCD2Q2TBF2 565 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 FLYWCH1Q4VC44 716 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 FAM171A1Q5VUB5 890 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 TIGD7Q6NT04 549 aaPredicted RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 LETMD1Q6P1Q0 360 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 EIF3MQ7L2H7 374 aaKnown RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 TMEM132CQ8N3T6 1108 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 OR52J3Q8NH60 311 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 RHEBL1Q8TAI7 183 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 APH1BQ8WW43 257 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
TSKU-203ENST00000527881 GDF15Q99988 308 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 MFSD1Q9H3U5 465 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 CMAHPQ9Y471 501 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 ARL5AQ9Y689 179 aa12.16□□□□□ -0.46
TSKU-203ENST00000527881 PSIP1O75475 530 aaKnown RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 AP2A2O94973 939 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 C1QBP02746 253 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 POU1F1P28069 291 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 AQP1P29972 269 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ADRA1AP35348 466 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 GALEQ14376 348 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 DOK6Q6PKX4 331 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 CDC26Q8NHZ8 85 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 MTFMTQ96DP5 389 aaKnown RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 CATSPERZQ9NTU4 200 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 MS4A12Q9NXJ0 267 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 LZTS3O60299 673 aaPredicted RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 RPS17P08708 135 aaKnown RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SOX9P48436 509 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 VLDLRP98155 873 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 CYP4F8P98187 520 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ZMYND11Q15326 602 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 LCN1P1Q5VSP4 162 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 COMMD7Q86VX2 200 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 OR13C4Q8NGS5 318 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 NIPAL2Q9H841 368 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 A0A0B4J293 547 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ZBTB42B2RXF5 422 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 GFRA2O00451 464 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 IFRD1O00458 451 aaPredicted RBP12.15□□□□□ -0.46
TSKU-203ENST00000527881 MUSKO15146 869 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 PLOD3O60568 738 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 GUCA1CO95843 209 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 F9P00740 461 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 POU2F1P14859 743 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SOX3P41225 446 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 KCNQ1P51787 676 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 DGKEP52429 567 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 AIF1P55008 147 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ZNF79Q15937 498 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 KYAT1Q16773 422 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 C9orf57Q5W0N0 161 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SMYD5Q6GMV2 418 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 ARSKQ6UWY0 536 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SLC34A3Q8N130 599 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SLC37A3Q8NCC5 494 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 NT5C3BQ969T7 300 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 SH3KBP1Q96B97 665 aa12.15□□□□□ -0.46
TSKU-203ENST00000527881 RNF31Q96EP0 1072 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms