RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SPATA6Q9NWH7 488 aaPredicted RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 SUCOQ9UBS9 1254 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 PTGES3LE9PB15 166 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 MUSKO15146 869 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CACNG3O60359 315 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 PGFP49763 221 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 OR4D1Q15615 310 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 DUSP6Q16828 381 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CXorf57Q6NSI4 855 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 HSD11B1LQ7Z5J1 315 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 NSMCE3Q96MG7 304 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 ZCCHC3Q9NUD5 404 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 OBP2AQ9NY56 170 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CALML5Q9NZT1 146 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 OR1A2Q9Y585 309 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 KCNJ13O60928 360 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 G6PDP11413 515 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 SOX9P48436 509 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 LARS2Q15031 903 aaKnown RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 APLFQ8IW19 511 aaPredicted RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 SVOPQ8N4V2 548 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 FAM156AQ8NDB6 213 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 RPLP0P6Q8NHW5 317 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 TPSD1Q9BZJ3 242 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 ZBTB26Q9HCK0 441 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 A8MUI8 341 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 WASH3PC4AMC7 463 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 H7BY64 318 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 C1GALT1C1LP0DN25 315 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 DGKQP52824 942 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 OTUD1Q5VV17 481 aaPredicted RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 ADCY4Q8NFM4 1077 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 OR2A12Q8NGT7 310 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 ANKRD49Q8WVL7 239 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 PRAP1Q96NZ9 151 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 VPS35Q96QK1 796 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 XKR8Q9H6D3 395 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 FBRSL1Q9HCM7 1045 aaKnown RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 HRASLS2Q9NWW9 162 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 LAMTOR5O43504 91 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 TYRP1P17643 537 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 UGT2B15P54855 530 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 BIKQ13323 160 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 C6orf136Q5SQH8 315 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 MANEALQ5VSG8 457 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 PGBD5Q8N414 524 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 OR52L1Q8NGH7 329 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 OR9I1Q8NGQ6 314 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 RASSF5Q8WWW0 418 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 MYLIPQ8WY64 445 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 FUBP1Q96AE4 644 aaKnown RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 LRRC58Q96CX6 371 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 DHRS4Q9BTZ2 278 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 GTPBP2Q9BX10 602 aaKnown RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 USE1Q9NZ43 259 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 GMPPBQ9Y5P6 360 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 HIST1H2ABP04908 130 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 HNRNPA2B1P22626 353 aaKnown RBP14.64□□□□□ -0.07
USP47-207ENST00000527733 HIST3H2AQ7L7L0 130 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 MAPK15Q8TD08 544 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 HIST1H2ACQ93077 130 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 PHF21AQ96BD5 680 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 SLC35G5Q96KT7 338 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 CGREF1Q99674 301 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 SUSD2Q9UGT4 822 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 PCDHGA2Q9Y5H1 932 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 NUMBLQ9Y6R0 609 aa14.64□□□□□ -0.07
USP47-207ENST00000527733 TMEM150CB9EJG8 249 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 PFDN1O60925 122 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 POLR2CP19387 275 aaPredicted RBP14.63□□□□□ -0.07
USP47-207ENST00000527733 MLLT3P42568 568 aaPredicted RBP14.63□□□□□ -0.07
USP47-207ENST00000527733 UFM1P61960 85 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 EGFLAMQ63HQ2 1017 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 OR4F3Q6IEY1 312 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP47-207ENST00000527733 CD200R1Q8TD46 325 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 FOXJ1Q92949 421 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 DTD2Q96FN9 168 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 DPYSL5Q9BPU6 564 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 RMI1Q9H9A7 625 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 RGPD3A6NKT7 1758 aaPredicted RBP14.63□□□□□ -0.07
USP47-207ENST00000527733 RGPD4Q7Z3J3 1758 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 A0A087WXM4 84 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 A0A1W2PP18 115 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 GJB3O75712 270 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 HSMCR30P0CW71 290 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 EEFSECP57772 596 aaKnown RBP14.63□□□□□ -0.07
USP47-207ENST00000527733 XIAPP98170 497 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.63□□□□□ -0.07
USP47-207ENST00000527733 ZNF534Q76KX8 674 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 SYVN1Q86TM6 617 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 CNTN4Q8IWV2 1026 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 PRSS58Q8IYP2 241 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 HLA-CQ95604 372 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 CNPPD1Q9BV87 410 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 OSBPL11Q9BXB4 747 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 HEBP1Q9NRV9 189 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 DKK3Q9UBP4 350 aa14.63□□□□□ -0.07
USP47-207ENST00000527733 SUFUQ9UMX1 484 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms