RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RASGEF1CQ8N431 466 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 FAM71DQ8N9W8 422 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ZBTB44Q8NCP5 570 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC24A4Q8NFF2 622 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 GPR156Q8NFN8 814 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ABHD11Q8NFV4 315 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CLHC1Q8NHS4 586 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 POC1BQ8TC44 478 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PNPT1Q8TCS8 783 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MAGEE2Q8TD90 523 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 RAB2BQ8WUD1 216 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ST8SIA4Q92187 359 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 TFAP2BQ92481 460 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 RFKQ969G6 155 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CPNE4Q96A23 557 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC25A36Q96CQ1 311 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SGTBQ96EQ0 304 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PGAP3Q96FM1 320 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MRPL48Q96GC5 212 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MARS2Q96GW9 593 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MS4A14Q96JA4 679 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ST6GAL2Q96JF0 529 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ZFYVE19Q96K21 471 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 C9orf72Q96LT7 481 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CNBD2Q96M20 576 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF285Q96NJ3 590 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 QKIQ96PU8 341 aaKnown RBP eCLIP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CSPG4P5Q96PW8 444 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC2A13Q96QE2 648 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PAPOLGQ9BWT3 736 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 OSBPL11Q9BXB4 747 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM120AQ9BXJ8 343 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 YTHDF1Q9BYJ9 559 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SEMA4CQ9C0C4 833 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC22A4Q9H015 551 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PIGUQ9H490 435 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SAV1Q9H4B6 383 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 LDAHQ9H6V9 325 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 RANBP3Q9H6Z4 567 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MLXIPQ9HAP2 919 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 TRPV4Q9HBA0 871 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SPACA1Q9HBV2 294 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ANLNQ9NQW6 1124 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 C19orf12Q9NSK7 152 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 OLA1Q9NTK5 396 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 EXD2Q9NVH0 621 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 FBXO34Q9NWN3 711 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 THUMPD1Q9NXG2 353 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 KLHL9Q9P2J3 617 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 RCOR3Q9P2K3 495 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CHORDC1Q9UHD1 332 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF229Q9UJW7 825 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PSME2Q9UL46 239 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SNX6Q9UNH7 406 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SAMHD1Q9Y3Z3 626 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 PSAT1Q9Y617 370 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 CLIC4Q9Y696 253 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 SESN1Q9Y6P5 492 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 HSPE1-MOB4S4R3N1 261 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MED1Q15648 1581 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ASTN2O75129 1339 aaPredicted RBP3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 TANC1Q9C0D5 1861 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 MAP3K4Q9Y6R4 1608 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 TNRQ92752 1358 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 ZMYM2Q9UBW7 1377 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 KIF1AQ12756 1690 aa3.62□□□□□ -1.83
CLNS1A-209ENST00000527299 NCAPD2Q15021 1401 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKRD36CQ5JPF3 1778 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ADGRB1O14514 1584 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 SAMD9LQ8IVG5 1584 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 VWDEQ8N2E2 1590 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 E2F8A0AVK6 867 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TRABD2BA6NFA1 517 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 MFSD2BA6NFX1 497 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TUBAL3A6NHL2 446 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 FAM47DPA6NHR8 397 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 HACD1B0YJ81 288 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 H0YIV9 168 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 I3L521 148 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 GPR171O14626 319 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF263O14978 683 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 KIAA0391O15091 583 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC31A2O15432 143 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CLDN3O15551 220 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CA12O43570 354 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CHMP2AO43633 222 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CST8O60676 142 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 HUS1O60921 280 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 PRKD3O94806 890 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNK2O95069 426 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 CPNE6O95741 557 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 TTLL1O95922 423 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 IGHV2-70P01814 119 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 S100A8P05109 93 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 QDPRP09417 244 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 RBP1P09455 135 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 FBP1P09467 338 aa3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 IFIT1P09914 478 aaKnown RBP3.61□□□□□ -1.83
CLNS1A-209ENST00000527299 RNF224P0DH78 156 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms