RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 FAM45BPQ6NSW5 357 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 PIWIL4Q7Z3Z4 852 aaKnown RBP19.76■□□□□ 0.75
VPS28-206ENST00000526734 FAM45AQ8TCE6 357 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 ZNF480Q8WV37 535 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 NDNQ99608 321 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 ZFYVE21Q9BQ24 234 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 ERP44Q9BS26 406 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 DPH7Q9BTV6 452 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 PLAC1Q9HBJ0 212 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 CUTCQ9NTM9 273 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 NSMCE4AQ9NXX6 385 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 WHRNQ9P202 907 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 ZFATQ9P243 1243 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 E7ENX8 843 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 SUV39H1O43463 412 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 CTSVO60911 334 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 SYF2O95926 243 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 ALBP02768 609 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 HRH2P25021 359 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 FOLR3P41439 243 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 RPL21P46778 160 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 EMP3P54852 163 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 TAP2Q03519 686 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PRDX1Q06830 199 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 MGAT5Q09328 741 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PDIA2Q13087 525 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 SSPNQ14714 243 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 MLIPQ5VWP3 458 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 ICE2Q659A1 982 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 TTLL10Q6ZVT0 673 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 MED25Q71SY5 747 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PRICKLE2Q7Z3G6 844 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 TMEM102Q8N9M5 508 aaPredicted RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 OR2Y1Q8NGV0 311 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 NACC2Q96BF6 587 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PLCD4Q9BRC7 762 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 WDR83Q9BRX9 315 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 ACAT2Q9BWD1 397 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PCBD2Q9H0N5 130 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 ACSS2Q9NR19 701 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 TAC3Q9UHF0 121 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 G3BP2Q9UN86 482 aaKnown RBP19.75■□□□□ 0.75
VPS28-206ENST00000526734 SNX24Q9Y343 169 aa19.75■□□□□ 0.75
VPS28-206ENST00000526734 PABPN1LA6NDY0 278 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 TP73O15350 636 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 EIF3HO15372 352 aaKnown RBP eCLIP19.74■□□□□ 0.75
VPS28-206ENST00000526734 KLF7O75840 302 aaPredicted RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 CTSBP07858 339 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 EZRP15311 586 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 IL2P60568 153 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 PDAP1Q13442 181 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 MRPL14Q6P1L8 145 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 SUSD1Q6UWL2 747 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 SLC26A11Q86WA9 606 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 FBXO36Q8NEA4 188 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 CCDC138Q96M89 665 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 PWWP2AQ96N64 755 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 ING2Q9H160 280 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 WDR54Q9H977 334 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 PARVBQ9HBI1 364 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 SLC6A20Q9NP91 592 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 TLK1Q9UKI8 766 aa19.74■□□□□ 0.75
VPS28-206ENST00000526734 NXT1Q9UKK6 140 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 PCDHGA9Q9Y5G4 932 aaKnown RBP19.74■□□□□ 0.75
VPS28-206ENST00000526734 SPTBP11277 2137 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 ALAS2P22557 587 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 CCND1P24385 295 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 IMPA1P29218 277 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 CDKN2DP55273 166 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 VSX2P58304 361 aaPredicted RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 TIAL1Q01085 375 aaKnown RBP eCLIP19.73■□□□□ 0.75
VPS28-206ENST00000526734 TSTA3Q13630 321 aaPredicted RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 WASHC2DQ5SRD0 308 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 HP1BP3Q5SSJ5 553 aaPredicted RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 RBM20Q5T481 1227 aaKnown RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 HECTD2Q5U5R9 776 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 ZNF425Q6IV72 752 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 PRMT9Q6P2P2 845 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 TRMT10BQ6PF06 316 aaKnown RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 PAQR3Q6TCH7 311 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 PAQR7Q86WK9 346 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 GPATCH11Q8N954 259 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 EEF1AKMT1Q8WVE0 214 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 PTERQ96BW5 349 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 LINGO1Q96FE5 620 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 PHACTR1Q9C0D0 580 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 SLC26A1Q9H2B4 701 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 CCDC177Q9NQR7 707 aaPredicted RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 MOCS1Q9NZB8 636 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 TP53TG5Q9Y2B4 290 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 VWA7Q9Y334 891 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 PTRH2Q9Y3E5 179 aaKnown RBP19.73■□□□□ 0.75
VPS28-206ENST00000526734 PCDHGB7Q9Y5F8 929 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 BAHCC1Q9P281 2608 aa19.73■□□□□ 0.75
VPS28-206ENST00000526734 SNRNP200O75643 2136 aaKnown RBP19.72■□□□□ 0.75
VPS28-206ENST00000526734 A0A0J9YVX5 310 aa19.72■□□□□ 0.75
VPS28-206ENST00000526734 ARGFXA6NJG6 315 aa19.72■□□□□ 0.75
VPS28-206ENST00000526734 TXNDC9O14530 226 aa19.72■□□□□ 0.75
VPS28-206ENST00000526734 HIST1H2AGP0C0S8 130 aaPredicted RBP19.72■□□□□ 0.75
VPS28-206ENST00000526734 HIST1H2ADP20671 130 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms