RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CALML6Q8TD86 181 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 PTERQ96BW5 349 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 FER1L6-AS2Q96M78 137 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 ZFYVE21Q9BQ24 234 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 FAM167BQ9BTA0 163 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 ACAT2Q9BWD1 397 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 CCDC68Q9H2F9 335 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 SLC6A20Q9NP91 592 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 FBXO6Q9NRD1 293 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-204ENST00000525207 P4HTMQ9NXG6 502 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 ANKMY1Q9P2S6 941 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 CTSFQ9UBX1 484 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 NXT1Q9UKK6 140 aaKnown RBP9.04□□□□□ -0.96
SF3B2-204ENST00000525207 SNX12Q9UMY4 172 aa9.04□□□□□ -0.96
SF3B2-204ENST00000525207 SPTBN1Q01082 2364 aaKnown RBP9.04□□□□□ -0.96
SF3B2-204ENST00000525207 HIVEP3Q5T1R4 2406 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 IGKV1-8A0A0C4DH67 115 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 A0A0J9YVX5 310 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MAGEB16A2A368 324 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 CTAGE9A4FU28 777 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 A6NL46 340 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 AGPSO00116 658 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 PEX12O00623 359 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SRPX2O60687 465 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MED26O95402 600 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SLC16A8O95907 504 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 ENO3P13929 434 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MMP11P24347 488 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 CMPK1P30085 196 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 VSX2P58304 361 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 YBX1P67809 324 aaKnown RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MPP1Q00013 466 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SRSF1Q07955 248 aaKnown RBP eCLIP9.03□□□□□ -0.962e-9■■□□□ 12.7
SF3B2-204ENST00000525207 CTBP1Q13363 440 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 ESPL1Q14674 2120 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 CRYMQ14894 314 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MYBPC3Q14896 1274 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 NKG7Q16617 165 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 PRR30Q53SZ7 412 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 JMJD6Q6NYC1 403 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SUSD1Q6UWL2 747 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 OVCH1Q7RTY7 1134 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 GALNT16Q8N428 558 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 METTL27Q8N6F8 245 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 RBMXL3Q8N7X1 1067 aaKnown RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SMPDL3AQ92484 453 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SLCO2A1Q92959 643 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 PNPLA2Q96AD5 504 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 NACC2Q96BF6 587 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SIGLEC10Q96LC7 697 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 DPH7Q9BTV6 452 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 KCNF1Q9H3M0 494 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 SYNPO2LQ9H987 977 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 GRPEL1Q9HAV7 217 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MRPS30Q9NP92 439 aaKnown RBP9.03□□□□□ -0.96
SF3B2-204ENST00000525207 LUZP4Q9P127 313 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 C5AR2Q9P296 337 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 TAC3Q9UHF0 121 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MAD1L1Q9Y6D9 718 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 COMMD10Q9Y6G5 202 aa9.03□□□□□ -0.96
SF3B2-204ENST00000525207 MAST4O15021 2626 aa9.02□□□□□ -0.96
SF3B2-204ENST00000525207 LOC105369274A0A096LPK9 316 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 LOC102723532A0A0G2JNH3 316 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 MASP2O00187 686 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 SOCS6O14544 535 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 DNALI1O14645 258 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ZSCAN12O43309 604 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 VPS26AO75436 327 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 CCNDBP1O95273 360 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ALPPP05187 535 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 MPC1LP0DKB6 136 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ERVK-10P10266 1014 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PGAM1P18669 254 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 IMPA1P29218 277 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 RPA3P35244 121 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 HSD17B2P37059 387 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 OR1D4P47884 311 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PNLIPRP1P54315 467 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 SOX8P57073 446 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PTK6Q13882 451 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PPP1R7Q15435 360 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 MUM1Q2TAK8 710 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PRTGQ2VWP7 1150 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 FAM214AQ32MH5 1076 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 WASHC2DQ5SRD0 308 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ICE2Q659A1 982 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ZNF425Q6IV72 752 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 KCNMB4Q86W47 210 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PAQR7Q86WK9 346 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms