RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PIK3CGP48736 1102 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 VSX2P58304 361 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ATP6V0D1P61421 351 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 TUBB4BP68371 445 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CYP4F2P78329 520 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 HSD11B2P80365 405 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MC2RQ01718 297 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SP140Q13342 867 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KIR2DS3Q14952 304 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC5A12Q1EHB4 618 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM83EQ2M2I3 478 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 LGSNQ5TDP6 509 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PRAMEF9Q5VWM5 478 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ICE2Q659A1 982 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ADNP2Q6IQ32 1131 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 LCN10Q6JVE6 187 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PWWP2BQ6NUJ5 590 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FBXO42Q6P3S6 717 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KLC3Q6P597 504 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 UNQ6494/PRO21346Q6UXR6 183 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 TIPARPQ7Z3E1 657 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PRSS42Q7Z5A4 293 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CLEC14AQ86T13 490 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 TMPRSS11BQ86T26 416 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ADAMTSL2Q86TH1 951 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 VASH2Q86V25 355 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 THOC6Q86W42 341 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MYLK4Q86YV6 388 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM126BQ8IUX1 230 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MCATQ8IVS2 390 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RNF175Q8N4F7 328 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 DNAJC22Q8N4W6 341 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB42Q8N4Z0 105 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 TEX9Q8N6V9 391 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF655Q8N720 491 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 BMPERQ8N8U9 685 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC38A9Q8NBW4 561 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FBXO15Q8NCQ5 510 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MYRIPQ8NFW9 859 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR48Q8TAF3 677 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 STAG3L4Q8TBR4 150 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ZFPM2Q8WW38 1151 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 N4BP2L2Q92802 583 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 NEIL2Q969S2 332 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RHBDF1Q96CC6 855 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FBXL8Q96CD0 374 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF501Q96CX3 271 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CRELD1Q96HD1 420 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC41A2Q96JW4 573 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC46A1Q96NT5 459 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CNTNAP3BQ96NU0 1288 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB11FIP5Q9BXF6 653 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PITPNM3Q9BZ71 974 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CNTNAP3Q9BZ76 1288 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ULBP3Q9BZM4 244 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SHCBP1LQ9BZQ2 653 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB33BQ9H082 229 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 EPB41L1Q9H4G0 881 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PRM3Q9NNZ6 103 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PDE7BQ9NP56 450 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ASCL3Q9NQ33 180 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 C1GALT1Q9NS00 363 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FGF21Q9NSA1 209 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 EURLQ9NYK6 297 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 AKAP7Q9P0M2 348 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PDP2Q9P2J9 529 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC17A7Q9P2U7 560 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 DHCR7Q9UBM7 475 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 EMCNQ9ULC0 261 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RAXQ9Y2V3 346 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MRPS2Q9Y399 296 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PCDHB11Q9Y5F2 797 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CACNA1EQ15878 2313 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 COL27A1Q8IZC6 1860 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 UQCRHLA0A096LP55 91 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A0G2JN53 185 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A1B0GTL3 188 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR91A4D1P6 747 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC151A5D8V7 595 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 A8MT66 165 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 H0YGG7 62 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 TAF4O00268 1085 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 EIF3FO00303 357 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MATN2O00339 956 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 COPEO14579 308 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 MAP2K7O14733 419 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 HGSO14964 777 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 RGS16O15492 202 aaPredicted RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 P2RX6O15547 441 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CTIFO43310 598 aaKnown RBP4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF749O43361 778 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 OR1F1O43749 312 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DLX3O60479 287 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 DNAJB6O75190 326 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 CDH16O75309 829 aa4.41□□□□□ -1.7
CHMP4A-202ENST00000524955 ERLIN1O75477 346 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms