RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 C4orf47A7E2U8 309 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 PPP6CO00743 305 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 UBFD1O14562 309 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 DUX1O43812 170 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 CRCPO75575 148 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 CD59P13987 128 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 PNLIPP16233 465 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 UGT2B7P16662 529 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 EPORP19235 508 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 TGM1P22735 817 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 CMPK1P30085 196 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 LSP1P33241 339 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 PKNOX1P55347 436 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 OR1D5P58170 312 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 OCRLQ01968 901 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 TRAF3Q13114 568 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 XKR6Q5GH73 641 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 EFL1Q7Z2Z2 1120 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 TMPRSS11BQ86T26 416 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 NAXDQ8IW45 347 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 LSMEM2Q8N112 164 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 DCBLD1Q8N8Z6 715 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 OR2A1Q8NGT9 310 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 AGR3Q8TD06 166 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 AGAP11Q8TF27 550 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 NEIL2Q969S2 332 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 C7orf26Q96N11 449 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 SORT1Q99523 831 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 SH2B3Q9UQQ2 575 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
TSPAN4-213ENST00000524895 IGHV1OR21-1A0A087WYE8 117 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 PRICKLE3O43900 615 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 CLDN9O95484 217 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 ESRRBO95718 433 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 LDOC1O95751 146 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 CDH1P12830 882 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 MPSTP25325 297 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 SH3BP2P78314 561 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 GPLD1P80108 840 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 ABATP80404 500 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 IRF8Q02556 426 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 NHLH1Q02575 133 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 PRDX1Q06830 199 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 CHIT1Q13231 466 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 AMZ1Q400G9 498 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 SH2D4BQ5SQS7 431 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 IRGCQ6NXR0 463 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 SPESP1Q6UW49 350 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 SPRED1Q7Z699 444 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 MILR1Q7Z6M3 343 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 SYVN1Q86TM6 617 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 CRLF3Q8IUI8 442 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 ZNF781Q8N8C0 355 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 OR2L3Q8NG85 312 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 OR4F6Q8NGB9 312 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 CDK15Q96Q40 435 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 OR2A14Q96R47 310 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 NTMT1Q9BV86 223 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 C20orf27Q9GZN8 174 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 MRPS30Q9NP92 439 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-213ENST00000524895 DNAH14Q0VDD8 3507 aa15.27■□□□□ 0.03
TSPAN4-213ENST00000524895 SH3BP5O60239 455 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 UGDHO60701 494 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 EDF1O60869 148 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 OR4F21O95013 312 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 EBLN1P0CF75 366 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 ERVPABLB-1P60509 514 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 SLC5A12Q1EHB4 618 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 CATSPEREQ5SY80 951 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 NKAIN2Q5VXU1 208 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 ATG9BQ674R7 924 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 NXPE4Q6UWF7 544 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 ATG14Q6ZNE5 492 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 SLCO4C1Q6ZQN7 724 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 ADCK2Q7Z695 626 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 LRRC34Q8IZ02 419 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 KIRREL3Q8IZU9 778 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 AFAP1L2Q8N4X5 818 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 NCSTNQ92542 709 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 GRAMD1AQ96CP6 724 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 PTCD3Q96EY7 689 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 CHMP6Q96FZ7 201 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 PHOX2BQ99453 314 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 CCDC3Q9BQI4 270 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 EHD1Q9H4M9 534 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 PELI2Q9HAT8 420 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 FGFR1OP2Q9NVK5 253 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 CUEDC1Q9NWM3 386 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 TRPS1Q9UHF7 1281 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 POMT2Q9UKY4 750 aa15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-213ENST00000524895 COL5A1P20908 1838 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms