RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 NPEPPSL1A6NEC2 478 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 ABHD2P08910 425 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ENO2P09104 434 aaPredicted RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 LIFP15018 202 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 CD1DP15813 335 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 NPPBP16860 134 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 CYP2A7P20853 494 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 MAGEA12P43365 314 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ITGA1P56199 1179 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 AP1S2P56377 157 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 RAB10P61026 200 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 CDKL1Q00532 357 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 RELAQ04206 551 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 BMPR2Q13873 1038 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 TSNQ15631 228 aaKnown RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 ICE2Q659A1 982 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 C6orf15Q6UXA7 325 aaPredicted RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 KLHDC8AQ8IYD2 350 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 SYTL1Q8IYJ3 562 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ARHGEF39Q8N4T4 335 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 RAB42Q8N4Z0 105 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ESX1Q8N693 406 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 DCAKDQ8WVC6 231 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 PTERQ96BW5 349 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 DPH7Q9BTV6 452 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ATG10Q9H0Y0 220 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 IGSF5Q9NSI5 407 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 PCMTD2Q9NV79 361 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 INTS7Q9NVH2 962 aaKnown RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
CLN8-207ENST00000524258 TAC3Q9UHF0 121 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 IL17BQ9UHF5 180 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 OARD1Q9Y530 152 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 HEATR5BQ9P2D3 2071 aa11.47□□□□□ -0.57
CLN8-207ENST00000524258 ATRXP46100 2492 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 LOC105369274A0A096LPK9 316 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 LOC102723532A0A0G2JNH3 316 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 FITM1A5D6W6 292 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 ZNF839A8K0R7 811 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 RIPK2O43353 540 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 ZNF749O43361 778 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 SCRG1O75711 98 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 MED26O95402 600 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 SYF2O95926 243 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 CCDC166P0CW27 439 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 STMN1P16949 149 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 ITGAXP20702 1163 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 PHBP35232 272 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 RPA3P35244 121 aaPredicted RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 TBPL1P62380 186 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 ABATP80404 500 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 NAE1Q13564 534 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 SLMAPQ14BN4 828 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 OR4D1Q15615 310 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 TEX35Q5T0J7 233 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 MROH9Q5TGP6 573 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 FRMPD2BQ6IN97 320 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 TRMT10CQ7L0Y3 403 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 ISCA2Q86U28 154 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 DSELQ8IZU8 1212 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 CENPLQ8N0S6 344 aaPredicted RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 OR4N4Q8N0Y3 316 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 GPR78Q96P69 363 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 OR2A5Q96R48 311 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 RUFY1Q96T51 708 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 UNKQ9C0B0 810 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
CLN8-207ENST00000524258 LHX9Q9NQ69 397 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 TXNDC16Q9P2K2 825 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 ANKMY1Q9P2S6 941 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 SERTAD3Q9UJW9 196 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 PCDHGA6Q9Y5G7 932 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 FER1L5A0AVI2 2057 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 ANKRD12Q6UB98 2062 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 PCM1Q15154 2024 aa11.46□□□□□ -0.57
CLN8-207ENST00000524258 MEN1O00255 615 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 TAPBPO15533 448 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
CLN8-207ENST00000524258 ONECUT2O95948 504 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 C2P06681 752 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 CRABP2P29373 138 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 CMPK1P30085 196 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 SLC26A3P40879 764 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 SLC6A12P48065 614 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 PMS2P54278 862 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 UCNP55089 124 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 CSNK1G2P78368 415 aa11.45□□□□□ -0.58
CLN8-207ENST00000524258 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms