RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	KCNE1B	A0A087WTH5	132 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006		A0A096LPI6	279 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ASPDH	A6ND91	283 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	MGAT4D	A6NG13	374 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TMEM202	A6NGA9	273 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	EVPLL	A8MZ36	301 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006		E7EQ34	232 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	AREL1	O15033	823 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SGTA	O43765	313 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TPST1	O60507	370 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	RNASEH2A	O75792	299 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	5e-8	■□□□□ 11.3
SPIDR-222	ENST00000524006	LYN	P07948	512 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLC35G4	P0C7Q5	338 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	COX7A2	P14406	83 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PRPS1L1	P21108	318 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	FCAR	P24071	287 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	IL12A	P29459	219 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	OPRD1	P41143	372 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	P2RY2	P41231	377 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	KIR3DL1	P43629	444 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CHN2	P52757	468 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CLDN8	P56748	225 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	MTPN	P58546	118 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PFN3	P60673	137 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TBPL1	P62380	186 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CHRNB3	Q05901	458 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	FCHO2	Q0JRZ9	810 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CAMK2G	Q13555	558 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SMAD2	Q15796	467 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CST6	Q15828	149 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	GAB4	Q2WGN9	574 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	USP39	Q53GS9	565 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SPIN4	Q56A73	249 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	SPANXN4	Q5MJ08	99 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	EGFLAM	Q63HQ2	1017 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	KRT80	Q6KB66	452 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	NEK5	Q6P3R8	708 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ADAMTSL4	Q6UY14	1074 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	GPR180	Q86V85	440 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	HEATR4	Q86WZ0	1026 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PTRH1	Q86Y79	214 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TBC1D21	Q8IYX1	336 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PACRGL	Q8N7B6	248 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CANT1	Q8WVQ1	401 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ELSPBP1	Q96BH3	223 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CNBD2	Q96M20	576 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TMEM74	Q96NL1	305 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PKP4	Q99569	1192 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	TRMT61B	Q9BVS5	477 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	OSBPL11	Q9BXB4	747 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	EBPL	Q9BY08	206 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	DPEP2	Q9H4A9	486 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PIF1	Q9H611	641 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	BRF2	Q9HAW0	419 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PRSS16	Q9NQE7	514 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	GPR34	Q9UPC5	381 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	INVS	Q9Y283	1065 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006		V9GYQ6	96 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	DOCK9	Q9BZ29	2069 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	ZDBF2	Q9HCK1	2354 aa		10.44	□□□□□ -0.74
SPIDR-222	ENST00000524006	RNF103-CHMP3	A0A140T963	221 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	C17orf113	A0A1B0GUU1	675 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	GNG14	A0A1W2PPG7	69 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	SERTM1	A2A2V5	107 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	KLHL33	A6NCF5	533 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	SAC3D1	A6NKF1	404 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	FAM220BP	B1ANY3	271 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006		H0YJX3	145 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	MID1	O15344	667 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	LINC01565	O15544	149 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	MBTPS2	O43462	519 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	POP7	O75817	140 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	EPN2	O95208	641 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	LRAT	O95237	230 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	PAPLN	O95428	1278 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	C1orf105	O95561	183 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	SLC16A8	O95907	504 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	LDLR	P01130	860 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	MTHFD1	P11586	935 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	CDH1	P12830	882 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	NCK1	P16333	377 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	HOXB6	P17509	224 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	DDX5	P17844	614 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	SDC1	P18827	310 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	C5AR1	P21730	350 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	KEL	P23276	732 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	IMPA1	P29218	277 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	SOX11	P35716	441 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	RPL3	P39023	403 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	WAS	P42768	502 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	MTHFR	P42898	656 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	NEK2	P51955	445 aa		10.43	□□□□□ -0.74
SPIDR-222	ENST00000524006	METAP1	P53582	386 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms