RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 DOLPP1Q86YN1 238 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 VRK3Q8IV63 474 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 SKA2Q8WVK7 121 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 ACAT2Q9BWD1 397 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 NAT10Q9H0A0 1025 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 CCM2LQ9NUG4 571 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 DDX56Q9NY93 547 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 TEKT2Q9UIF3 430 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 TRHDEQ9UKU6 1024 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 SLC5A10A0PJK1 596 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF487B1APH4 448 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 PRRG2O14669 202 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 RASGRF2O14827 1237 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 OR1I1O60431 355 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 AP2A2O94973 939 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 MLYCDO95822 493 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 OR56A5P0C7T3 313 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ADRA1AP35348 466 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 BDKRB1P46663 353 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 MAT1AQ00266 395 aaKnown RBP11.04□□□□□ -0.64
SDCBP-211ENST00000523441 CACNG1Q06432 222 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 NR1I3Q14994 352 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ITPRIPL1Q6GPH6 555 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 RANBP10Q6VN20 620 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 LANCL3Q6ZV70 420 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 GALNTL5Q7Z4T8 443 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 TGIF2LYQ8IUE0 185 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 SLC22A18Q96BI1 424 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 C10orf90Q96M02 699 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 VAT1Q99536 393 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 KCNK13Q9HB14 408 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ABCF3Q9NUQ8 709 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 RUVBL2Q9Y230 463 aaKnown RBP11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF835Q9Y2P0 537 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 ABCA2Q9BZC7 2435 aa11.04□□□□□ -0.64
SDCBP-211ENST00000523441 SCN3AQ9NY46 2000 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TRBV5-4A0A0C4DH59 114 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 FITM1A5D6W6 292 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 OR2W5A6NFC9 320 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 IQCF5A8MTL0 148 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 SMTNL1A8MU46 457 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ASNA1O43681 348 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 MAN1A2O60476 641 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 CDC40O60508 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ZWINTO95229 277 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TSPAN12O95859 305 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 S1PR4O95977 384 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TPOP07202 933 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ANXA5P08758 320 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 COMTP21964 271 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 RFC3P40938 356 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ZBED6P86452 979 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TUBA3CQ13748 450 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 OR1C1Q15619 314 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 MAPKAPK3Q16644 382 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 HKDC1Q2TB90 917 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 MINDY4Q4G0A6 757 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 KRTCAP3Q53RY4 240 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ANKRD20A2Q5SQ80 823 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ANKRD20A1Q5TYW2 823 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ANKRD20A3Q5VUR7 823 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 PRMT9Q6P2P2 845 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TUBA3EQ6PEY2 450 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 RIPOR1Q6ZS17 1223 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 TAOK1Q7L7X3 1001 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 CHDHQ8NE62 594 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 OR2L8Q8NGY9 312 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 CDKN2AIPNLQ96HQ2 116 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 UTP23Q9BRU9 249 aaKnown RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF700Q9H0M5 742 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 LIME1Q9H400 295 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 LUC7LQ9NQ29 371 aaKnown RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 LCMT1Q9UIC8 334 aa11.03□□□□□ -0.64
SDCBP-211ENST00000523441 AAR2Q9Y312 384 aaKnown RBP11.03□□□□□ -0.64
SDCBP-211ENST00000523441 DNHD1Q96M86 4753 aa11.02□□□□□ -0.64
SDCBP-211ENST00000523441 A0A0A6YYC8 382 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 TMEM200CA6NKL6 621 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 H0YGG7 62 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 I3L1I5 382 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 AKR1B10O60218 316 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 SRPX2O60687 465 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 TMEM253P0C7T8 217 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 C8orf89P0DMQ9 161 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CD46P15529 392 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CTNNA2P26232 953 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CD96P40200 585 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 EFNA3P52797 238 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms