RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SYT11Q9BT88 431 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UNKQ9C0B0 810 aaKnown RBP6.01□□□□□ -1.45
PABPC1-220ENST00000522658 KLHL25Q9H0H3 589 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 ASB8Q9H765 288 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 MVB12BQ9H7P6 319 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UGT1A7Q9HAW7 530 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UGT1A10Q9HAW8 530 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UGT1A8Q9HAW9 530 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 MRM3Q9HC36 420 aaKnown RBP6.01□□□□□ -1.45
PABPC1-220ENST00000522658 GLOD4Q9HC38 313 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 CHST11Q9NPF2 352 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 LUC7LQ9NQ29 371 aaKnown RBP6.01□□□□□ -1.45
PABPC1-220ENST00000522658 P4HTMQ9NXG6 502 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 ACTR10Q9NZ32 417 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 VTI1BQ9UEU0 232 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 RSPH14Q9UHP6 348 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.01□□□□□ -1.45
PABPC1-220ENST00000522658 UNC79Q9P2D8 2635 aa6.01□□□□□ -1.45
PABPC1-220ENST00000522658 TRGV8A0A0C4DH27 118 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 A0A0J9YY10 115 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 A0A1W2PQJ5 194 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MACROD2A1Z1Q3 448 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 WIPF3A6NGB9 483 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 ISM1B1AKI9 464 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 QSOX1O00391 747 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 BTN3A1O00481 513 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MAP2K7O14733 419 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 AURKAO14965 403 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 GPR39O43194 453 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 BUD23O43709 281 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 SPOPO43791 374 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 CLEC3AO75596 197 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 STK10O94804 968 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 CRTAMO95727 393 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MLYCDO95822 493 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 TPM3P06753 285 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 SNRPB2P08579 225 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 TPM1P09493 284 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MSL3P1P0C860 447 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 ERVK-10P10266 1014 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 KDELR1P24390 212 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 CTNNA2P26232 953 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 PRDX3P30048 256 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 HNRNPH3P31942 346 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 SHMT2P34897 504 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 TSFMP43897 325 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 ARSFP54793 590 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 GEMP55040 296 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 WNT3AP56704 352 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MPP3Q13368 585 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 LAMB3Q13751 1172 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 PRPSAP1Q14558 356 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 MESDQ14696 234 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 BCL7AQ4VC05 210 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 ATP13A4Q4VNC1 1196 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 TEX44Q53QW1 395 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 SIRPB2Q5JXA9 342 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 METRNLQ641Q3 311 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 SP5Q6BEB4 398 aaPredicted RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 ITPRIPL1Q6GPH6 555 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 LCN10Q6JVE6 187 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 RHBDD2Q6NTF9 364 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 IGFL3Q6UXB1 125 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 Q6ZS92 163 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 NLRC3Q7RTR2 1065 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 CUZD1Q86UP6 607 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 CCDC50Q8IVM0 306 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 LINC01356Q8N9X3 169 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 SLC38A9Q8NBW4 561 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 OR52E1Q8NGJ3 308 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 FAM71BQ8TC56 605 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 ZNF398Q8TD17 642 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 FAF2Q96CS3 445 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 EID2BQ96D98 161 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 RMDN2Q96LZ7 410 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 PPM1MQ96MI6 270 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 TRIB3Q96RU7 358 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 COPS8Q99627 209 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 LHPPQ9H008 270 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 IL26Q9NPH9 171 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 ZNHIT6Q9NWK9 470 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 SMOXQ9NWM0 555 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 DDX56Q9NY93 547 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 DHCR7Q9UBM7 475 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 SH3BGRL2Q9UJC5 107 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 FBXL4Q9UKA2 621 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 NXT1Q9UKK6 140 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 CDYLQ9Y232 598 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 TDRKHQ9Y2W6 561 aaKnown RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 SPO11Q9Y5K1 396 aa6□□□□□ -1.45
PABPC1-220ENST00000522658 USP9XQ93008 2570 aaPredicted RBP6□□□□□ -1.45
PABPC1-220ENST00000522658 RP1L1Q8IWN7 2480 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-220ENST00000522658 SHANK1Q9Y566 2161 aa5.99□□□□□ -1.45
PABPC1-220ENST00000522658 A0A1B0GX78 115 aa5.99□□□□□ -1.45
PABPC1-220ENST00000522658 CCDC78A2IDD5 438 aa5.99□□□□□ -1.45
PABPC1-220ENST00000522658 ZNF487B1APH4 448 aa5.99□□□□□ -1.45
PABPC1-220ENST00000522658 JRKO75564 520 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms