RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SPAARA0A1B0GVQ0 90 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 C9P02748 559 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CEACAM1P13688 526 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 LSSP48449 732 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 NAGLUP54802 743 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CLPPQ16740 277 aaPredicted RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 ZNF574Q6ZN55 896 aaPredicted RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 FAM92BQ6ZTR7 304 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 TRIM73Q86UV7 250 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 ALYREFQ86V81 257 aaKnown RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 CCNYL1Q8N7R7 359 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 SNX31Q8N9S9 440 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 OR2L3Q8NG85 312 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 WDR48Q8TAF3 677 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 NSUN5Q96P11 429 aaKnown RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 DPYSL5Q9BPU6 564 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 MN1Q10571 1320 aaPredicted RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 HEATR5BQ9P2D3 2071 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 DMXL1Q9Y485 3027 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 GIPC1O14908 333 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 KIF1CO43896 1103 aaKnown RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 SUPT7LO94864 414 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CHN1P15882 459 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CMPK1P30085 196 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 ASPHQ12797 758 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CDC16Q13042 620 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 GTF2H2Q13888 395 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 SPIDRQ14159 915 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 PDK4Q16654 411 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 KIAA1614Q5VZ46 1190 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 GTF2H2CQ6P1K8 395 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 GOLGA7Q7Z5G4 137 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 ZNF483Q8TF39 744 aaPredicted RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 MAP3K3Q99759 626 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 GATA5Q9BWX5 397 aaPredicted RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 MRPS30Q9NP92 439 aaKnown RBP23.28■■□□□ 1.32
PVT1-212ENST00000521951 KLHL3Q9UH77 587 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 DYRK1BQ9Y463 629 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 ANGPTL3Q9Y5C1 460 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 KCNE2Q9Y6J6 123 aa23.28■■□□□ 1.32
PVT1-212ENST00000521951 CCNDBP1O95273 360 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 FKBP9O95302 570 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 FGF3P11487 239 aaPredicted RBP23.27■■□□□ 1.32
PVT1-212ENST00000521951 EPB42P16452 691 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 EPORP19235 508 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 CDH3P22223 829 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 MPSTP25325 297 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 PLA2G5P39877 138 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 ABATP80404 500 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 C17orf64Q86WR6 236 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 PPP4R1Q8TF05 950 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 NEIL2Q969S2 332 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 CD180Q99467 661 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 ZBTB26Q9HCK0 441 aa23.27■■□□□ 1.32
PVT1-212ENST00000521951 CNOT1A5YKK6 2376 aaKnown RBP23.27■■□□□ 1.32
PVT1-212ENST00000521951 A0A0J9YY10 115 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 D6RAR5 112 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 FTH1P19P0C7X4 201 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 NOVA1P51513 510 aaKnown RBP23.26■■□□□ 1.31
PVT1-212ENST00000521951 CDH13P55290 713 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 SIM1P81133 766 aaPredicted RBP23.26■■□□□ 1.31
PVT1-212ENST00000521951 SNAP47Q5SQN1 464 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 OR4D9Q8NGE8 314 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 SLC5A11Q8WWX8 675 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 SREK1Q8WXA9 508 aaKnown RBP23.26■■□□□ 1.31
PVT1-212ENST00000521951 CAPS2Q9BXY5 557 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 GSTO2Q9H4Y5 243 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 SLC6A20Q9NP91 592 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 C1GALT1Q9NS00 363 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 CUEDC1Q9NWM3 386 aaPredicted RBP23.26■■□□□ 1.31
PVT1-212ENST00000521951 GPRC5BQ9NZH0 403 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 PDP2Q9P2J9 529 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 KLHL20Q9Y2M5 609 aa23.26■■□□□ 1.31
PVT1-212ENST00000521951 COL27A1Q8IZC6 1860 aaPredicted RBP23.25■■□□□ 1.31
PVT1-212ENST00000521951 TLCD2A6NGC4 264 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 DKK1O94907 266 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 CDH1P12830 882 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 PVRP15151 417 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 PIK3CGP48736 1102 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 ATP1A2P50993 1020 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 CLCQ05315 142 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 CFAP157Q5JU67 520 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 CACHD1Q5VU97 1274 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 ZCCHC23Q6ZST2 131 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 ARFGAP2Q8N6H7 521 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 OR6Y1Q8NGX8 325 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 RTKNQ9BST9 563 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 DPH7Q9BTV6 452 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 SEMA6CQ9H3T2 930 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 NOL11Q9H8H0 719 aaKnown RBP23.25■■□□□ 1.31
PVT1-212ENST00000521951 IPPKQ9H8X2 491 aa23.25■■□□□ 1.31
PVT1-212ENST00000521951 SEMA4BQ9NPR2 832 aaPredicted RBP23.25■■□□□ 1.31
PVT1-212ENST00000521951 PIEZO1Q92508 2521 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 IGKV1-8A0A0C4DH67 115 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 IGHV5-10-1A0A0J9YXX1 117 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 E7EQ34 232 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 KCNK5O95279 499 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 NEFHP12036 1026 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 TSPAN8P19075 237 aa23.24■■□□□ 1.31
PVT1-212ENST00000521951 GNAZP19086 355 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms