RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ENTPD2Q9Y5L3 495 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PIPSLA2A3N6 862 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 C2orf74A8MZ97 194 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 PRICKLE3O43900 615 aaPredicted RBP14.78□□□□□ -0.04
LSM1-203ENST00000520755 RASSF9O75901 435 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
LSM1-203ENST00000520755 THRAP10827 490 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 EPORP19235 508 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 TAC1P20366 129 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 PSMB5P28074 263 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
LSM1-203ENST00000520755 HNMTP50135 292 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 ZFP36L1Q07352 338 aaKnown RBP14.78□□□□□ -0.04
LSM1-203ENST00000520755 NAE1Q13564 534 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 PCBP2Q15366 365 aaKnown RBP eCLIP14.78□□□□□ -0.04
LSM1-203ENST00000520755 UNC50Q53HI1 259 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 ZNF678Q5SXM1 525 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 LIPMQ5VYY2 423 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 SUSD1Q6UWL2 747 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 ATG14Q6ZNE5 492 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 SYTL1Q8IYJ3 562 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 TCAIMQ8N3R3 496 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 RCBTB1Q8NDN9 531 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 OR6Y1Q8NGX8 325 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 L3HYPDHQ96EM0 354 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 NSUN5Q96P11 429 aaKnown RBP14.78□□□□□ -0.04
LSM1-203ENST00000520755 OR4K3Q96R72 315 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 SCNM1Q9BWG6 230 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 RAB33BQ9H082 229 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 ACTR10Q9NZ32 417 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 EPHA6Q9UF33 1036 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 PCTPQ9UKL6 214 aa14.78□□□□□ -0.04
LSM1-203ENST00000520755 WDR91A4D1P6 747 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 ISM1B1AKI9 464 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 MATN2O00339 956 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 E2F3O00716 465 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 BIRC5O15392 142 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 KIF1CO43896 1103 aaKnown RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 C9P02748 559 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 ARRB2P32121 409 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 CCKBRP32239 447 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 DNAJB13P59910 316 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 HERVK_113P63132 956 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 YBX1P67809 324 aaKnown RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 TSTA3Q13630 321 aaPredicted RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 HHATQ5VTY9 493 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 CACHD1Q5VU97 1274 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 FAM219BQ5XKK7 198 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 ZCCHC23Q6ZST2 131 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 SLC22A9Q8IVM8 553 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 ZNF483Q8TF39 744 aaPredicted RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 ATL1Q8WXF7 558 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 GATA5Q9BWX5 397 aaPredicted RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 ERVK-6Q9BXR3 956 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 CD244Q9BZW8 370 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 STRADBQ9C0K7 418 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 GSTO2Q9H4Y5 243 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 ZBTB26Q9HCK0 441 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 INTS7Q9NVH2 962 aaKnown RBP14.77□□□□□ -0.05
LSM1-203ENST00000520755 POMT2Q9UKY4 750 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 SPTBN2O15020 2390 aa14.77□□□□□ -0.05
LSM1-203ENST00000520755 MED19A0JLT2 244 aaPredicted RBP14.76□□□□□ -0.05
LSM1-203ENST00000520755 TMX2-CTNND1H3BSU7 103 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 WDR47O94967 919 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 UGT2B7P16662 529 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 BGNP21810 368 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 CDH3P22223 829 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 PRDX3P30048 256 aaKnown RBP14.76□□□□□ -0.05
LSM1-203ENST00000520755 HSD17B2P37059 387 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 CCR10P46092 362 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 SEPHS1P49903 392 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 C16orf72Q14CZ0 275 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 ERMP1Q7Z2K6 904 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 LRRC70Q7Z2Q7 622 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 CACTIN-AS1Q8N1I8 211 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 SMPDL3AQ92484 453 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 CCDC126Q96EE4 140 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 MED8Q96G25 268 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 PPM1MQ96MI6 270 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 CD180Q99467 661 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 MAP3K3Q99759 626 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 PAIP2Q9BPZ3 127 aaKnown RBP14.76□□□□□ -0.05
LSM1-203ENST00000520755 CCDC177Q9NQR7 707 aaPredicted RBP14.76□□□□□ -0.05
LSM1-203ENST00000520755 ABCF3Q9NUQ8 709 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 PDP2Q9P2J9 529 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 WASF3Q9UPY6 502 aa14.76□□□□□ -0.05
LSM1-203ENST00000520755 A0A1B0GTL3 188 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 TLCD2A6NGC4 264 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 ZNF839A8K0R7 811 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
LSM1-203ENST00000520755 PRAMEF4O60810 478 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 TRIM13O60858 407 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 STK16O75716 305 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 IMPDH1P20839 514 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 NAGLUP54802 743 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 TRA2AQ13595 282 aaKnown RBP eCLIP14.75□□□□□ -0.05
LSM1-203ENST00000520755 KIR2DS3Q14952 304 aa14.75□□□□□ -0.05
LSM1-203ENST00000520755 CHI3L2Q15782 390 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms