RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SMPD3Q9NY59 655 aaPredicted RBP11.85□□□□□ -0.51
ERGIC1-208ENST00000520399 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
ERGIC1-208ENST00000520399 TIMM22Q9Y584 194 aa11.85□□□□□ -0.51
ERGIC1-208ENST00000520399 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC30A4O14863 429 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 POP4O95707 220 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TGM6O95932 706 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 FECHP22830 423 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RGS6P49758 472 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF132P52740 706 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TBRG1Q3YBR2 411 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 C1orf94Q6P1W5 598 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NUP54Q7Z3B4 507 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SYVN1Q86TM6 617 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ALDH16A1Q8IZ83 802 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 OR2L2Q8NH16 312 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 CLEC4CQ8WTT0 213 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TSSK3Q96PN8 268 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 COLEC10Q9Y6Z7 277 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SNED1Q8TER0 1413 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TEX13CA0A0J9YWL9 993 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 IL12BP29460 328 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NRG1Q02297 640 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SNAPC1Q16533 368 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 DPYSL2Q16555 572 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF181Q2M3W8 571 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MED27Q6P2C8 311 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PGM2L1Q6PCE3 622 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 DPY19L3Q6ZPD9 716 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 CADM2Q8N3J6 435 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SUN3Q8TAQ9 357 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 BAZ2BQ9UIF8 2168 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MDFIC2A0A1B0GVS7 189 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 C9IYK1 514 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 YKT6O15498 198 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 OR2B3O76000 313 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 P4HA3Q7Z4N8 544 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PSMG2Q969U7 264 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF700Q9H0M5 742 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 DNAJA2O60884 412 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RFPL2O75678 378 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SCGB1D2O95969 90 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PTPN2P17706 415 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 CTSKP43235 329 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 KIR3DL1P43629 444 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RPIAP49247 311 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PPIGQ13427 754 aaKnown RBP eCLIP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ARL13AQ5H913 290 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 ADGRG6Q86SQ4 1221 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NRSN1Q8IZ57 195 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 LPIN3Q9BQK8 851 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 TLR6Q9Y2C9 796 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MAU2Q9Y6X3 613 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MPZL2O60487 215 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 HCN1O60741 890 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 MT-CYBP00156 380 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RPS2P15880 293 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 IDSP22304 550 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 HSPA7P48741 367 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 VLDLRP98155 873 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 LIPEQ05469 1076 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 COLEC12Q5KU26 742 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 LINGO2Q7L985 606 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RALGPS2Q86X27 583 aaPredicted RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 BANPQ8N9N5 519 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 PNLDC1Q8NA58 520 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 BRSK1Q8TDC3 778 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NKD1Q969G9 470 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 NODALQ96S42 347 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RBM4BQ9BQ04 359 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 RBM4Q9BWF3 364 aaKnown RBP11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 FAM83DQ9H4H8 585 aa11.84□□□□□ -0.51
ERGIC1-208ENST00000520399 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 TSTD3H0UI37 97 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 M0R2N6 131 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 AIREO43918 545 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 PLGP00747 810 aaPredicted RBP11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 C8GP07360 202 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 PNLIPRP1P54315 467 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 SF1Q15637 639 aaKnown RBP11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 LIX1Q8N485 282 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 C2orf73Q8N5S3 287 aaPredicted RBP11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 ZNF781Q8N8C0 355 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 ROPN1LQ96C74 230 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 PLATP00750 562 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 CAP1Q01518 475 aa11.83□□□□□ -0.52
ERGIC1-208ENST00000520399 SOWAHAQ2M3V2 549 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms