RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 E7ENX8 843 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 H0YHG0 523 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 MKRN2OSH3BPM6 223 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CCDC188H7C350 402 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ZBTB14O43829 449 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 NRP2O60462 931 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 MED26O95402 600 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TTC4O95801 387 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 SLC16A8O95907 504 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 SKIV2L2P42285 1042 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PAFAH1B1P43034 410 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TRPC1P48995 793 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ITGA8P53708 1063 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PNLIPRP1P54315 467 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ARSFP54793 590 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 FOXL2P58012 376 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 DR1Q01658 176 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TAP2Q03519 686 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PRDX1Q06830 199 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CHAF1BQ13112 559 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CUL1Q13616 776 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 MORF4L2Q15014 288 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 NCF4Q15080 339 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 COLEC12Q5KU26 742 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 RBM20Q5T481 1227 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TRMT10BQ6PF06 316 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PAQR3Q6TCH7 311 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ATG14Q6ZNE5 492 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TTLL10Q6ZVT0 673 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 OVCH1Q7RTY7 1134 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CNTN4Q8IWV2 1026 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PDIK1LQ8N165 341 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 RAB42Q8N4Z0 105 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PPFIBP2Q8ND30 876 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PROKR1Q8TCW9 393 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CD200R1Q8TD46 325 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF480Q8WV37 535 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 SMPDL3AQ92484 453 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 PTERQ96BW5 349 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 RUNDC3BQ96NL0 473 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 WDR83Q9BRX9 315 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 TRIM51Q9BSJ1 452 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 FAM167BQ9BTA0 163 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 NAT9Q9BTE0 207 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 DPH7Q9BTV6 452 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 NDC1Q9BTX1 674 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 DHRS4Q9BTZ2 278 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 CCDC68Q9H2F9 335 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 SYNPO2LQ9H987 977 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 STOX2Q9P2F5 926 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 IFT80Q9P2H3 777 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 ZC3H7BQ9UGR2 993 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 RFPL1O75677 317 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CEACAM4O75871 244 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 WISP1O95388 367 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CATP04040 527 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 UMODP07911 640 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CD63P08962 238 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ENO3P13929 434 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CMPK1P30085 196 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 HSD17B2P37059 387 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 PGGT1BP53609 377 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CDKN2DP55273 166 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 VSX2P58304 361 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 MRPS25P82663 173 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 GRM7Q14831 915 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ZXDCQ2QGD7 858 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 FAM214AQ32MH5 1076 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 TTLL9Q3SXZ7 439 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 LACTB2Q53H82 288 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 TCTE1Q5JU00 501 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CPZQ66K79 652 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 STEAP4Q687X5 459 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF425Q6IV72 752 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ASB18Q6ZVZ8 466 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 COX15Q7KZN9 410 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 PIWIL4Q7Z3Z4 852 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 GALNT7Q86SF2 657 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CPNE9Q8IYJ1 553 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 DTWD1Q8N5C7 304 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 LRRC39Q96DD0 335 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CERS2Q96G23 380 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 KRT12Q99456 494 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 NDNQ99608 321 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 TRIM31Q9BZY9 425 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 TRIM4Q9C037 500 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 MRPS30Q9NP92 439 aaKnown RBP8.94□□□□□ -0.98
HDAC3-215ENST00000519474 CUTCQ9NTM9 273 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 TXLNGQ9NUQ3 528 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 IRAK4Q9NWZ3 460 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 MOCS1Q9NZB8 636 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 SLC17A6Q9P2U8 582 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ANAPC2Q9UJX6 822 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 ADAMTS6Q9UKP5 1117 aa8.94□□□□□ -0.98
HDAC3-215ENST00000519474 SRPK3Q9UPE1 567 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms