RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 RAD54LQ92698 747 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 CITED2Q99967 270 aaPredicted RBP2.73□□□□□ -1.97
SKP1-203ENST00000517625 MLPHQ9BV36 600 aaPredicted RBP2.73□□□□□ -1.97
SKP1-203ENST00000517625 BARHL1Q9BZE3 327 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 TLE6Q9H808 572 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 DNAJC4Q9NNZ3 241 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 SH3GLB2Q9NR46 395 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 ERAP1Q9NZ08 941 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 RNF150Q9ULK6 438 aa2.73□□□□□ -1.97
SKP1-203ENST00000517625 A0A087WW49 117 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 PRR23AA6NEV1 266 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 ERVV-2B6SEH9 535 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 H0YAE9 185 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 ZNF197O14709 1029 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 SLC30A4O14863 429 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 EPHB6O15197 1021 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 STX6O43752 255 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 PGLSO95336 258 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GBAP04062 536 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 RPN1P04843 607 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 GPIP06744 558 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 VIMP08670 466 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 SPP1P10451 314 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GNB3P16520 340 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 JAK1P23458 1154 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 RGS7P49802 495 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 NR0B1P51843 470 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 MFAP3P55082 362 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 UBASH3AP57075 661 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GNB1P62873 340 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 MYL7Q01449 175 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 TSPY1Q01534 308 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 CACNG1Q06432 222 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 TRAP1Q12931 704 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 TUBB2AQ13885 445 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 RBM39Q14498 530 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 RBBP7Q16576 425 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 PHLDA2Q53GA4 152 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 LRRC73Q5JTD7 316 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 TXNRD3NBQ6F5E7 133 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 FAM53AQ6NSI3 398 aaPredicted RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 ZNF449Q6P9G9 518 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 DCLRE1AQ6PJP8 1040 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 IL17RELQ6ZVW7 336 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GALNTL5Q7Z4T8 443 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 SPATA21Q7Z572 469 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 ANKRD23Q86SG2 305 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 DZIP1Q86YF9 867 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 EID3Q8N140 333 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 WDSUB1Q8N9V3 476 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 Q8NFD4 153 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 OR10Q1Q8NGQ4 319 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 OR2T11Q8NH01 316 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 KCNE4Q8WWG9 221 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 NR4A3Q92570 626 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 P2RX5Q93086 422 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 CENPTQ96BT3 561 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 LRR1Q96L50 414 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 C4orf45Q96LM5 186 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 TUBB2BQ9BVA1 445 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GTPBP2Q9BX10 602 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 SDCBP2Q9H190 292 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 ZNF71Q9NQZ8 489 aaPredicted RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 INTS9Q9NV88 658 aaKnown RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 LEF1Q9UJU2 399 aaPredicted RBP2.72□□□□□ -1.97
SKP1-203ENST00000517625 GTF3C4Q9UKN8 822 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 GAB2Q9UQC2 676 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 RIPK3Q9Y572 518 aa2.72□□□□□ -1.97
SKP1-203ENST00000517625 DOCK7Q96N67 2140 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 A0A087WYN8 130 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 TRAV34A0A0B4J273 112 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 FAM170AA1A519 330 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 C5orf52A6NGY3 159 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 HHLA1C9JL84 531 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 CDC123O75794 336 aaPredicted RBP2.71□□□□□ -1.98
SKP1-203ENST00000517625 IGLV1-44P01699 117 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 HMBSP08397 361 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 PDGFRAP16234 1089 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 CEBPBP17676 345 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 ALDH4A1P30038 563 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 TIA1P31483 386 aaKnown RBP eCLIP2.71□□□□□ -1.982e-8■■■■□ 23.8
SKP1-203ENST00000517625 CDX1P47902 265 aaPredicted RBP2.71□□□□□ -1.98
SKP1-203ENST00000517625 MTCP1P56278 107 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 KRT83P78385 493 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 SULT2A1Q06520 285 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 HYAL1Q12794 435 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 TNK1Q13470 666 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 HERC3Q15034 1050 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 RRS1Q15050 365 aaKnown RBP2.71□□□□□ -1.98
SKP1-203ENST00000517625 UGP2Q16851 508 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 GFI1BQ5VTD9 330 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 LYSMD4Q5XG99 296 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 UGT3A1Q6NUS8 523 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 ADAM5Q6NVV9 412 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 GSG1LQ6UXU4 331 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 C15orf39Q6ZRI6 1047 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 GPR141Q7Z602 305 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 NRARPQ7Z6K4 114 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 ZNF329Q86UD4 541 aa2.71□□□□□ -1.98
SKP1-203ENST00000517625 CCDC60Q8IWA6 550 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms