RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 HIBCHQ6NVY1 386 aaPredicted RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF585AQ6P3V2 769 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ALKBH5Q6P6C2 394 aaKnown RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF783Q6ZMS7 281 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF571Q7Z3V5 609 aaPredicted RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PRSS42Q7Z5A4 293 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 C5orf24Q7Z6I8 188 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 SETD3Q86TU7 594 aaPredicted RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CAND1Q86VP6 1230 aaKnown RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 VSIG1Q86XK7 387 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CREG2Q8IUH2 290 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 RHOT2Q8IXI1 618 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 MCOLN2Q8IZK6 566 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 DEFB106AQ8N104 65 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PYROXD2Q8N2H3 581 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 MREGQ8N565 214 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF611Q8N823 705 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 NIPA2Q8N8Q9 360 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ATP6V0D2Q8N8Y2 350 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 OR56A4Q8NGH8 313 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 OR5M9Q8NGP3 310 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM76AQ8TAV0 307 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 DQX1Q8TE96 717 aaKnown RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC37A2Q8TED4 501 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CPA5Q8WXQ8 436 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PSMF1Q92530 271 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PROX1Q92786 737 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CAVIN3Q969G5 261 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 NTAN1Q96AB6 310 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 TMIGD2Q96BF3 282 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM149B1Q96BN6 582 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 C3orf49Q96BT1 292 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PTERQ96BW5 349 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 NTNG2Q96CW9 530 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 COQ8BQ96D53 544 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CLIP3Q96DZ5 547 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF514Q96K75 400 aaPredicted RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 TGM7Q96PF1 710 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 RCHY1Q96PM5 261 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PCDHB18PQ96TA0 734 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CHP1Q99653 195 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 C1QTNF7Q9BXJ2 289 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 C1QTNF3Q9BXJ4 246 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 HES7Q9BYE0 225 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 GSDMCQ9BYG8 508 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 LACRTQ9GZZ8 138 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ACBD3Q9H3P7 528 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 DEF6Q9H4E7 631 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 EPB41L1Q9H4G0 881 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 WDCPQ9H6R7 721 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 SH2D2AQ9NP31 389 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 ACP6Q9NPH0 428 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 KLHL1Q9NR64 748 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PNPLA3Q9NST1 481 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PCMTD2Q9NV79 361 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 UVRAGQ9P2Y5 699 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 PPARGC1AQ9UBK2 798 aaKnown RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 RASAL2Q9UJF2 1139 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 MID2Q9UJV3 735 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 CNOT11Q9UKZ1 510 aaKnown RBP2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 SUFUQ9UMX1 484 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 NENFQ9UMX5 172 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 TFR2Q9UP52 801 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 TESMINQ9Y4I5 508 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 DTNAQ9Y4J8 743 aa2.98□□□□□ -1.93
SCARNA13-201ENST00000516672 IGLV3-10A0A075B6K4 115 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 TRBV23OR9-2A0A075B6M9 112 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 A0A087X0T9 212 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 A0A0A6YYK5 440 aaPredicted RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 TYW5A2RUC4 315 aaKnown RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 GOLGA6CA6NDK9 693 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 C5orf60A6NFR6 353 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 WASH4PA8MWX3 477 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 ZNF487B1APH4 448 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 GOLGA8KD6RF30 607 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 E9PQ18 207 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 CLGNO14967 610 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 AKR1B10O60218 316 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 ACSL4O60488 711 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 PRMT3O60678 531 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 SRGAP2O75044 1071 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 CLDN11O75508 207 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 RNF8O76064 485 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 IPO7O95373 1038 aaKnown RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 MOCS3O95396 460 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 PRNPP04156 253 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 H2AFZP0C0S5 128 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 FAM228BP0C875 321 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 GOLGA6DP0CG33 693 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 SELEP16581 610 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 RRM1P23921 792 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 MCM3P25205 808 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 LOXP28300 417 aaPredicted RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 EEF1DP29692 281 aaKnown RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 L1CAMP32004 1257 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 RFC1P35251 1148 aaPredicted RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 CYLC1P35663 651 aaPredicted RBP2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 ETFBP38117 255 aa2.97□□□□□ -1.93
SCARNA13-201ENST00000516672 SLC1A1P43005 524 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms