RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PDE12Q6L8Q7 609 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 DNM1P34Q6PK57 102 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 OR2T34Q8NGX1 318 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 OR2T3Q8NH03 318 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SLC35A5Q9BS91 424 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 VNN3Q9NY84 501 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PRPF19Q9UMS4 504 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PLLPQ9Y342 182 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 MID1O15344 667 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 AHCYL1O43865 530 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 NIPSNAP2O75323 286 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CLCN4P51793 760 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ELF3P78545 371 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ELOCQ15369 112 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 LPCAT4Q643R3 524 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ADNP2Q6IQ32 1131 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 P2RY13Q9BPV8 354 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 FGFBP2Q9BYJ0 223 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 Q9N2J8 555 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 IRAK2O43187 625 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 COL6A2P12110 1019 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PREPP48147 710 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PTDSS1P48651 473 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 KCNQ1P51787 676 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 GBX2P52951 348 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 AP2S1P53680 142 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 MTPNP58546 118 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 DCTN2Q13561 401 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ARL13AQ5H913 290 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF565Q8N9K5 539 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PDPRQ8NCN5 879 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 OR5T2Q8NGG2 359 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 OR52E4Q8NGH9 312 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 TRMT10AQ8TBZ6 339 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 EPYCQ99645 322 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 METTL8Q9H825 291 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 SNTG1Q9NSN8 517 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 LYARQ9NX58 379 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CNTN3Q9P232 1028 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 RBPJLQ9UBG7 517 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 FBXO9Q9UK97 447 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 TIMM8BQ9Y5J9 83 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 LOC100509620A0A075B734 347 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PRORSD1PA6NEY8 169 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PDCD5O14737 125 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 SNX3O60493 162 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 OTX2P32243 289 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 VSX2P58304 361 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 KLF10Q13118 480 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 MYLK3Q32MK0 819 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CRTC2Q53ET0 693 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 TMPPEQ6ZT21 453 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 MON1BQ7L1V2 547 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 MREGQ8N565 214 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 NINJ1Q92982 152 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 POP5Q969H6 163 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 COL21A1Q96P44 957 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 STRA6Q9BX79 667 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 IRF2BPLQ9H1B7 796 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 FADS3Q9Y5Q0 445 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ATRNL1Q5VV63 1379 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 EME2A4GXA9 379 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 FSCN2O14926 492 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 NOBOXO60393 691 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 KAT7O95251 611 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PRPS2P11908 318 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 AZGP1P25311 298 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PLP2Q04941 152 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 AVL9Q8NBF6 648 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PPP1R14BQ96C90 147 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ORAI3Q9BRQ5 295 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 FKBP14Q9NWM8 211 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ATXN10Q9UBB4 475 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 R3HDM2Q9Y2K5 976 aaKnown RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 C15orf41Q9Y2V0 281 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PCDHGB7Q9Y5F8 929 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 UPK3BL1B0FP48 263 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 UPK3BL2E5RIL1 263 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 K7EPI3 171 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 LEFTY2O00292 366 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CXCR6O00574 342 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 SLC1A2P43004 574 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CTBP2P56545 445 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 SRYQ05066 204 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF542PQ5EBM4 170 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 UBQLNLQ8IYU4 475 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CENPSQ8N2Z9 138 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 GATSQ8NAP1 163 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 UFD1Q92890 307 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 PRR11Q96HE9 360 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 CMKLR1Q99788 373 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 C12orf4Q9NQ89 552 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 DNMT3AQ9Y6K1 912 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ILVBLA1L0T0 632 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ZSCAN5BA6NJL1 495 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 ARPC4P59998 168 aa10.76□□□□□ -0.69
TRIM41-209ENST00000515834 RFTN1Q14699 578 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-209ENST00000515834 SCGB2B2Q4G0G5 96 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms