RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DDX25Q9UHL0 483 aaKnown RBP3.29□□□□□ -1.88
LINC01088-211ENST00000515597 ZHX1Q9UKY1 873 aaPredicted RBP3.29□□□□□ -1.88
LINC01088-211ENST00000515597 DNMT1P26358 1616 aaKnown RBP3.29□□□□□ -1.88
LINC01088-211ENST00000515597 EFCAB5A4FU69 1503 aa3.29□□□□□ -1.88
LINC01088-211ENST00000515597 CDK12Q9NYV4 1490 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 PLCH2O75038 1416 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 hCG_1809904A0A1W2PP81 198 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 A0A1W2PPE2 198 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 A0A1W2PR64 198 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 SYNDIG1LA6NDD5 238 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 KPNA7A9QM74 516 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 PI15O43692 258 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 PGM3O95394 542 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 PFKFB1P16118 471 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 TLX1P31314 330 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 HNF4AP41235 474 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 MAZP56270 477 aaKnown RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 GSCP56915 257 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 C2CD6Q53TS8 623 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 BMP2KLQ5H9B9 411 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 GARNL3Q5VVW2 1013 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 ADIPOR2Q86V24 386 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 HOGA1Q86XE5 327 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 ARHGAP24Q8N264 748 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 POMGNT2Q8NAT1 580 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 NPEPL1Q8NDH3 523 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 OR10G8Q8NGN5 311 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 SLAMF9Q96A28 289 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 ZNF414Q96IQ9 312 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 GCNAQ96QF7 691 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 USP28Q96RU2 1077 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 WWTR1Q9GZV5 400 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 TBC1D17Q9HA65 648 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 EQTNQ9NQ60 294 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 SPHK1Q9NYA1 384 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 GDE1Q9NZC3 331 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 B3GAT1Q9P2W7 334 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 CACNG4Q9UBN1 327 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 EPHA6Q9UF33 1036 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 IL17BQ9UHF5 180 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 KLK13Q9UKR3 277 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 TP53TG3Q9ULZ0 132 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 MAGED1Q9Y5V3 778 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 DIP2CQ9Y2E4 1556 aa3.28□□□□□ -1.88
LINC01088-211ENST00000515597 CEP170BQ9Y4F5 1589 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-211ENST00000515597 NPATQ14207 1427 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ZNF142P52746 1687 aaPredicted RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 MYO3AQ8NEV4 1616 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 FEZF1A0PJY2 475 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ANKRD61A6NGH8 418 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ERAL1O75616 437 aaKnown RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ZSCAN5DPP0CG00 497 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 NR2F1P10589 423 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 DNASE1P24855 282 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 LEPRP48357 1165 aaKnown RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 CDH13P55290 713 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 TPD52P55327 224 aaPredicted RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 HUNKP57058 714 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 C1QTNF8P60827 252 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 HSPB3Q12988 150 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 SPDYCQ5MJ68 293 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ELFN2Q5R3F8 820 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 WLSQ5T9L3 541 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 MFSD4BQ5TF39 518 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 Q6ZRP5 223 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ENOSF1Q7L5Y1 443 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 PRPF39Q86UA1 669 aaKnown RBP3.27□□□□□ -1.89
LINC01088-211ENST00000515597 LMNTD2Q8IXW0 634 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 CFAP206Q8IYR0 622 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 TTC30BQ8N4P2 665 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ATL1Q8WXF7 558 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 SLCO2A1Q92959 643 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 SFXN2Q96NB2 322 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 DGAT2Q96PD7 388 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ABHD1Q96SE0 405 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 PIGQQ9BRB3 760 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 CCDC106Q9BWC9 280 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 KLHL4Q9C0H6 718 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 MIS12Q9H081 205 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 OPA3Q9H6K4 179 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 SERINC1Q9NRX5 453 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 DAPK2Q9UIK4 370 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 ROBO1Q9Y6N7 1651 aa3.27□□□□□ -1.89
LINC01088-211ENST00000515597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PCDH11YQ9BZA8 1340 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 TCRBV21S2A2A0A5A6 115 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 TMEM221A6NGB7 291 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 C15orf61A6NNL5 157 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 MEIS2O14770 477 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 HSPA8P11142 646 aaKnown RBP3.26□□□□□ -1.89
LINC01088-211ENST00000515597 CYP2A7P20853 494 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 MTHFRP42898 656 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 BECN1Q14457 450 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 NECTIN1Q15223 517 aa3.26□□□□□ -1.89
LINC01088-211ENST00000515597 PHLDA2Q53GA4 152 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms