RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TAC3Q9UHF0 121 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 TLK1Q9UKI8 766 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 IKZF3Q9UKT9 509 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 PDE10AQ9Y233 779 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 MAN2B2Q9Y2E5 1009 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 MAU2Q9Y6X3 613 aa11.02□□□□□ -0.65
VCAN-212ENST00000515397 CCDC88CQ9P219 2028 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 FAM187AA6NFU0 413 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 A6NL46 340 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 CXorf49A8MYA2 514 aaPredicted RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 E7ENX8 843 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SMAPO00193 183 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SLC28A2O43868 658 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 RAB40ALP0C0E4 278 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 PLA2G2AP14555 144 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 ITGAXP20702 1163 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 AGXTP21549 392 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 IMPA1P29218 277 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 CMPK1P30085 196 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SSTR1P30872 391 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 OTX2P32243 289 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 OR1D4P47884 311 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 PLTPP55058 493 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SNRPNP63162 240 aaKnown RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 TAP2Q03519 686 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 MGAT5Q09328 741 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 ZNF460Q14592 562 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 NCF4Q15080 339 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 UGT8Q16880 541 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 NKAIN1Q4KMZ8 207 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 THEMIS2Q5TEJ8 643 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 DUPD1Q68J44 220 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 RHBDD2Q6NTF9 364 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 TMEM207Q6UWW9 146 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 NEK10Q6ZWH5 1172 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 STRA8Q7Z7C7 330 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SYVN1Q86TM6 617 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 CNTN4Q8IWV2 1026 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 HMGCLL1Q8TB92 370 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 UNKQ9C0B0 810 aaKnown RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 CHRNA10Q9GZZ6 450 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 ATG10Q9H0Y0 220 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 MRPS30Q9NP92 439 aaKnown RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 CUTCQ9NTM9 273 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 INTS7Q9NVH2 962 aaKnown RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 TAS2R13Q9NYV9 303 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 KLHL42Q9P2K6 505 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 SH2B3Q9UQQ2 575 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 VWA7Q9Y334 891 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 PTRH2Q9Y3E5 179 aaKnown RBP11.01□□□□□ -0.65
VCAN-212ENST00000515397 MRFAP1Q9Y605 127 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 COMMD10Q9Y6G5 202 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 AP1M2Q9Y6Q5 423 aa11.01□□□□□ -0.65
VCAN-212ENST00000515397 FER1L5A0AVI2 2057 aa11□□□□□ -0.65
VCAN-212ENST00000515397 BSNQ9UPA5 3926 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ESYT3A0FGR9 886 aa11□□□□□ -0.65
VCAN-212ENST00000515397 TARM1B6A8C7 271 aa11□□□□□ -0.65
VCAN-212ENST00000515397 C9J4A7 227 aa11□□□□□ -0.65
VCAN-212ENST00000515397 H0YGG7 62 aa11□□□□□ -0.65
VCAN-212ENST00000515397 H7BY64 318 aa11□□□□□ -0.65
VCAN-212ENST00000515397 FFAR3O14843 346 aa11□□□□□ -0.65
VCAN-212ENST00000515397 GPR42O15529 346 aa11□□□□□ -0.65
VCAN-212ENST00000515397 KLF7O75840 302 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 URI1O94763 535 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 TSPAN12O95859 305 aa11□□□□□ -0.65
VCAN-212ENST00000515397 PDGFAP04085 211 aa11□□□□□ -0.65
VCAN-212ENST00000515397 HBQ1P09105 142 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ERGP11308 486 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ENO3P13929 434 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 ARF3P61204 181 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
VCAN-212ENST00000515397 NAE1Q13564 534 aa11□□□□□ -0.65
VCAN-212ENST00000515397 RAPSNQ13702 412 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ATP1A4Q13733 1029 aa11□□□□□ -0.65
VCAN-212ENST00000515397 PHKG1Q16816 387 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ZC3H12BQ5HYM0 836 aaKnown RBP11□□□□□ -0.65
VCAN-212ENST00000515397 ICE2Q659A1 982 aa11□□□□□ -0.65
VCAN-212ENST00000515397 UGT3A1Q6NUS8 523 aa11□□□□□ -0.65
VCAN-212ENST00000515397 TLDC1Q6P9B6 456 aa11□□□□□ -0.65
VCAN-212ENST00000515397 MAATS1Q7Z4T9 603 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ADCK2Q7Z695 626 aa11□□□□□ -0.65
VCAN-212ENST00000515397 CCDC25Q86WR0 208 aa11□□□□□ -0.65
VCAN-212ENST00000515397 LRRC56Q8IYG6 542 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 PRSS58Q8IYP2 241 aa11□□□□□ -0.65
VCAN-212ENST00000515397 SPATA6LQ8N4H0 392 aa11□□□□□ -0.65
VCAN-212ENST00000515397 C9orf43Q8TAL5 461 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
VCAN-212ENST00000515397 LRRC39Q96DD0 335 aa11□□□□□ -0.65
VCAN-212ENST00000515397 PRAP1Q96NZ9 151 aa11□□□□□ -0.65
VCAN-212ENST00000515397 MACROD1Q9BQ69 325 aa11□□□□□ -0.65
VCAN-212ENST00000515397 PLCD4Q9BRC7 762 aa11□□□□□ -0.65
VCAN-212ENST00000515397 ZFATQ9P243 1243 aa11□□□□□ -0.65
VCAN-212ENST00000515397 GPN3Q9UHW5 284 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 TP53TG5Q9Y2B4 290 aa11□□□□□ -0.65
VCAN-212ENST00000515397 HEMK1Q9Y5R4 338 aaPredicted RBP11□□□□□ -0.65
VCAN-212ENST00000515397 ANKRD12Q6UB98 2062 aa11□□□□□ -0.65
VCAN-212ENST00000515397 OR2A25A4D2G3 310 aa10.99□□□□□ -0.65
VCAN-212ENST00000515397 E7ESA3 106 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms