RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CDC16Q13042 620 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 SPIDRQ14159 915 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 NAA25Q14CX7 972 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 TMEM71Q6P5X7 295 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 OR4D9Q8NGE8 314 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 ZNF483Q8TF39 744 aaPredicted RBP20.23■□□□□ 0.83
LSM6-207ENST00000515311 TGM7Q96PF1 710 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 NUDT22Q9BRQ3 303 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 MECRQ9BV79 373 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 ACAT2Q9BWD1 397 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 ZMYND15Q9H091 742 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 PDP2Q9P2J9 529 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 KLK4Q9Y5K2 254 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 KCNE2Q9Y6J6 123 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 A0A0J9YY10 115 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 CASC3O15234 703 aaKnown RBP20.22■□□□□ 0.83
LSM6-207ENST00000515311 TOX3O15405 576 aaPredicted RBP20.22■□□□□ 0.83
LSM6-207ENST00000515311 H2AFYO75367 372 aaKnown RBP20.22■□□□□ 0.83
LSM6-207ENST00000515311 KATNA1O75449 491 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 EPB42P16452 691 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 GNAZP19086 355 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 CMPK1P30085 196 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 GFERP55789 205 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 GTF2H2Q13888 395 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 GTF2H2CQ6P1K8 395 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 C17orf64Q86WR6 236 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 NUDCD3Q8IVD9 361 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 ARFGAP2Q8N6H7 521 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 TEX9Q8N6V9 391 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 MDM1Q8TC05 714 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 MGARPQ8TDB4 240 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 RTKNQ9BST9 563 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 SEMA6CQ9H3T2 930 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 SYNDIG1Q9H7V2 258 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 MLXIPLQ9NP71 852 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 C1GALT1Q9NS00 363 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 ABCF3Q9NUQ8 709 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 SEMA5BQ9P283 1151 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 ATXN7L1Q9ULK2 861 aaPredicted RBP20.22■□□□□ 0.83
LSM6-207ENST00000515311 APOBEC2Q9Y235 224 aaKnown RBP20.22■□□□□ 0.83
LSM6-207ENST00000515311 DYRK1BQ9Y463 629 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 ANGPTL3Q9Y5C1 460 aa20.22■□□□□ 0.83
LSM6-207ENST00000515311 ATXN8OSP0DMR3 200 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 HOXB3P14651 431 aaPredicted RBP20.21■□□□□ 0.83
LSM6-207ENST00000515311 EPORP19235 508 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 HRH2P25021 359 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 NAGLUP54802 743 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 PCDH1Q08174 1060 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 RSPO4Q2I0M5 234 aaPredicted RBP20.21■□□□□ 0.83
LSM6-207ENST00000515311 UNC50Q53HI1 259 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 PRSS42Q7Z5A4 293 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 GOLGA7Q7Z5G4 137 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 SNX31Q8N9S9 440 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 SLC5A11Q8WWX8 675 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 NEIL2Q969S2 332 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 PAIP2Q9BPZ3 127 aaKnown RBP20.21■□□□□ 0.83
LSM6-207ENST00000515311 MRPS30Q9NP92 439 aaKnown RBP20.21■□□□□ 0.83
LSM6-207ENST00000515311 ANKMY1Q9P2S6 941 aa20.21■□□□□ 0.83
LSM6-207ENST00000515311 HEATR5BQ9P2D3 2071 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 SPAARA0A1B0GVQ0 90 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 SUPT7LO94864 414 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 FTH1P19P0C7X4 201 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 FGF3P11487 239 aaPredicted RBP20.2■□□□□ 0.82
LSM6-207ENST00000515311 CHN1P15882 459 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 CDH3P22223 829 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 LSSP48449 732 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 NOVA1P51513 510 aaKnown RBP20.2■□□□□ 0.82
LSM6-207ENST00000515311 SIM1P81133 766 aaPredicted RBP20.2■□□□□ 0.82
LSM6-207ENST00000515311 CFAP157Q5JU67 520 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 KIAA1614Q5VZ46 1190 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 ZNF574Q6ZN55 896 aaPredicted RBP20.2■□□□□ 0.82
LSM6-207ENST00000515311 RBM44Q6ZP01 1051 aaKnown RBP20.2■□□□□ 0.82
LSM6-207ENST00000515311 FAM92BQ6ZTR7 304 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 FRMD7Q6ZUT3 714 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 TMPRSS9Q7Z410 1059 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 CCNYL1Q8N7R7 359 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 ABHD11Q8NFV4 315 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 OR6Y1Q8NGX8 325 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 PPP4R1Q8TF05 950 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 TRMOQ9BU70 441 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 EHD1Q9H4M9 534 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 GSTO2Q9H4Y5 243 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 TMEM9Q9P0T7 183 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 SH2B3Q9UQQ2 575 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 STK38LQ9Y2H1 464 aa20.2■□□□□ 0.82
LSM6-207ENST00000515311 IGHV5-10-1A0A0J9YXX1 117 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 CLGNO14967 610 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 MLYCDO95822 493 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 ANKRD34CP0C6C1 535 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 THRAP10827 490 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 SERPINB5P36952 375 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 GRIA3P42263 894 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 YBX1P67809 324 aaKnown RBP20.19■□□□□ 0.82
LSM6-207ENST00000515311 INSM1Q01101 510 aaPredicted RBP20.19■□□□□ 0.82
LSM6-207ENST00000515311 CLCQ05315 142 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 TRA2AQ13595 282 aaKnown RBP eCLIP20.19■□□□□ 0.82
LSM6-207ENST00000515311 CCDC157Q569K6 752 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 SLCO4C1Q6ZQN7 724 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 SLCO6A1Q86UG4 719 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 TRIM73Q86UV7 250 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms