RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 TAZQ16635 292 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 ZNF658BQ4V348 819 aaPredicted RBP11.15□□□□□ -0.62
SMAD5-210ENST00000515005 ZC3H12BQ5HYM0 836 aaKnown RBP11.15□□□□□ -0.62
SMAD5-210ENST00000515005 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 ZDHHC20Q5W0Z9 365 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 NCBP2-AS2Q69YL0 99 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 ARHGAP11AQ6P4F7 1023 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 PRSS57Q6UWY2 283 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 HORMAD2Q8N7B1 307 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 ZNF398Q8TD17 642 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 IMP4Q96G21 291 aaKnown RBP11.15□□□□□ -0.62
SMAD5-210ENST00000515005 SRPK1Q96SB4 655 aaKnown RBP11.15□□□□□ -0.62
SMAD5-210ENST00000515005 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 PNPLA3Q9NST1 481 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 PARVAQ9NVD7 372 aa11.15□□□□□ -0.62
SMAD5-210ENST00000515005 TDRKHQ9Y2W6 561 aaKnown RBP11.15□□□□□ -0.62
SMAD5-210ENST00000515005 PKD1L1Q8TDX9 2849 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 PES1O00541 588 aaKnown RBP11.14□□□□□ -0.63
SMAD5-210ENST00000515005 ACVR2AP27037 513 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 KLK7P49862 253 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
SMAD5-210ENST00000515005 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 PAFAH1B3Q15102 231 aaKnown RBP11.14□□□□□ -0.63
SMAD5-210ENST00000515005 GXYLT1Q4G148 440 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 FILIP1LQ4L180 1135 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 BOLA3Q53S33 107 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 ZNF227Q86WZ6 799 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 LMNTD1Q8N9Z9 388 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 OR52N2Q8NGI0 321 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 OR5M9Q8NGP3 310 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 SLCO2A1Q92959 643 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 CEP41Q9BYV8 373 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMAD5-210ENST00000515005 FAM215AQ9Y5M1 114 aa11.14□□□□□ -0.63
SMAD5-210ENST00000515005 NPIPA2E9PIF3 369 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 NPIPA3F8WFD2 350 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 EPHB6O15197 1021 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 CTSVO60911 334 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 CD48P09326 243 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 PCK1P35558 622 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 PRKCIP41743 596 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 POU4F3Q15319 338 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 KAZNQ674X7 775 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 RTL6Q6ICC9 239 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 FRMPD2BQ6IN97 320 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 FIGLAQ6QHK4 219 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 LGI4Q8N135 537 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 CCNYQ8ND76 341 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 TADA1Q96BN2 335 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 C10orf90Q96M02 699 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 AGPAT1Q99943 283 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 ATG10Q9H0Y0 220 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
SMAD5-210ENST00000515005 ZC3H7BQ9UGR2 993 aaKnown RBP11.13□□□□□ -0.63
SMAD5-210ENST00000515005 LOC105369274A0A096LPK9 316 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 LOC102723532A0A0G2JNH3 316 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 CLDN4O14493 209 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 HSP90AA1P07900 732 aaKnown RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 C8orf89P0DMQ9 161 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 EPXP11678 715 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 NID1P14543 1247 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 GBE1Q04446 702 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 SLC10A2Q12908 348 aaPredicted RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 MESDQ14696 234 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 CATSPEREQ5SY80 951 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 ZNF585AQ6P3V2 769 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 B3GNT6Q6ZMB0 384 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 CPEB2Q7Z5Q1 589 aaKnown RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 ELOA2Q8IYF1 753 aaPredicted RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 OR4N4Q8N0Y3 316 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 C2orf73Q8N5S3 287 aaPredicted RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 AMER3Q8N944 861 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 POGLUT1Q8NBL1 392 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 DCUN1D1Q96GG9 259 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 DEFB127Q9H1M4 99 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 TRABDQ9H4I3 376 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.12□□□□□ -0.63
SMAD5-210ENST00000515005 ADGRE2Q9UHX3 823 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 ASF1AQ9Y294 204 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 ARHGAP21Q5T5U3 1957 aa11.12□□□□□ -0.63
SMAD5-210ENST00000515005 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
SMAD5-210ENST00000515005 TMCO5BA8MYB1 307 aa11.11□□□□□ -0.63
SMAD5-210ENST00000515005 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.634e-7■■■□□ 17.9
SMAD5-210ENST00000515005 SRPX2O60687 465 aaPredicted RBP11.11□□□□□ -0.63
SMAD5-210ENST00000515005 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
SMAD5-210ENST00000515005 EIF2S1P05198 315 aaKnown RBP11.11□□□□□ -0.63
SMAD5-210ENST00000515005 MX2P20592 715 aa11.11□□□□□ -0.63
SMAD5-210ENST00000515005 IFI35P80217 286 aaPredicted RBP11.11□□□□□ -0.63
SMAD5-210ENST00000515005 RPA4Q13156 261 aa11.11□□□□□ -0.63
SMAD5-210ENST00000515005 KRT81Q14533 505 aa11.11□□□□□ -0.63
SMAD5-210ENST00000515005 SYT16Q17RD7 645 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms