RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 TBX2Q13207 712 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ARHGEF7Q14155 803 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 LY6DQ14210 128 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 PDK2Q15119 407 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 HADHQ16836 314 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 PYCR3Q53H96 274 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 C10orf62Q5T681 223 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 C1QL3Q5VWW1 255 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ALS2CLQ60I27 953 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 SPOCD1Q6ZMY3 1216 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 Q6ZRM9 215 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 Q6ZSN1 163 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 H2AFVQ71UI9 128 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 RAB11FIP2Q7L804 512 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 VASH2Q86V25 355 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ZFAND4Q86XD8 727 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 LIX1LQ8IVB5 337 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCDC13Q8IYE1 715 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 FBXO39Q8N4B4 442 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ARL14Q8N4G2 192 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 OR8K1Q8NGG5 319 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 SPATA22Q8NHS9 363 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 WDR36Q8NI36 951 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CTNNBL1Q8WYA6 563 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 AP2M1Q96CW1 435 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 HDAC11Q96DB2 347 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 COX14Q96I36 57 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 OLFM3Q96PB7 478 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 TSGA13Q96PP4 275 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 RNF157Q96PX1 679 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 TRIB3Q96RU7 358 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 MNTQ99583 582 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 HERPUD2Q9BSE4 406 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 GPR87Q9BY21 358 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 TINAGL1Q9GZM7 467 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 POLR1EQ9GZS1 481 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 TSPY26PQ9H489 355 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 C10orf88Q9H8K7 445 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 NHEJ1Q9H9Q4 299 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 PCDH9Q9HC56 1237 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 THSD1Q9NS62 852 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 NCKIPSDQ9NZQ3 722 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 SEPT10Q9P0V9 454 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 UVRAGQ9P2Y5 699 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 APPL1Q9UKG1 709 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 SHOC2Q9UQ13 582 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 KCNK6Q9Y257 313 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 LOXL2Q9Y4K0 774 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 HEY1Q9Y5J3 304 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 DOPEY2Q9Y3R5 2298 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ANKRD12Q6UB98 2062 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 IGHV5-10-1A0A0J9YXX1 117 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 F8W8V4 182 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 M0QYG6 137 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 PSMD11O00231 422 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 NUDT21O43809 227 aaKnown RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MTX2O75431 263 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 DNAJB5O75953 348 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MTA2O94776 668 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MT-CYBP00156 380 aaPredicted RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ITGA2BP08514 1039 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 KRT7P08729 469 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ACP5P13686 325 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 RBMS1P29558 406 aaKnown RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ALDH4A1P30038 563 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCKBRP32239 447 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MAN1A1P33908 653 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 STT3AP46977 705 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 SPINT3P49223 89 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MAPK10P53779 464 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 IFI35P80217 286 aaPredicted RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 DPTQ07507 201 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 AP1B1Q10567 949 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ILF3Q12906 894 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 CTBP1Q13363 440 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ICAM4Q14773 271 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 HENMT1Q5T8I9 393 aaKnown RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 SLC9A4Q6AI14 798 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 MFSD7Q6UXD7 560 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 RFX6Q8HWS3 928 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 BBS5Q8N3I7 341 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ZNF843Q8N446 348 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 PDPRQ8NCN5 879 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCNYQ8ND76 341 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 GPR26Q8NDV2 337 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 SLC37A2Q8TED4 501 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 NAT14Q8WUY8 206 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 NSMCE1Q8WV22 266 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 KRT35Q92764 455 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 HAUS1Q96CS2 278 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 SGCZQ96LD1 299 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 AGAP3Q96P47 875 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 OR2M4Q96R27 311 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 ARPC5LQ9BPX5 153 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 TLR10Q9BXR5 811 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 GSDMCQ9BYG8 508 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 DPH1Q9BZG8 443 aa6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 UNKQ9C0B0 810 aaKnown RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 REXO4Q9GZR2 422 aaKnown RBP6.26□□□□□ -1.41
HMGN1P17-201ENST00000513734 DEF6Q9H4E7 631 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms