RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-267	ENST00000512336	LMNTD1	Q8N9Z9	388 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	TTC29	Q8NA56	475 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	HEXDC	Q8WVB3	486 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	TREX2	Q9BQ50	279 aa	Predicted RBP	11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	RNF32	Q9H0A6	362 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	ZDHHC3	Q9NYG2	299 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	IL1RAPL1	Q9NZN1	696 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	POLG2	Q9UHN1	485 aa		11.64	□□□□□ -0.55
DDR1-267	ENST00000512336	ACAN	P16112	2415 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	FAM227A	F5H4B4	570 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	KRT1	P04264	644 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	PRSS56	P0CW18	603 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	ITGAM	P11215	1152 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	PECAM1	P16284	738 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	HADHB	P55084	474 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	OCA2	Q04671	838 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	OLIG2	Q13516	323 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	MESD	Q14696	234 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	RPS6KA1	Q15418	735 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	TCTE1	Q5JU00	501 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	MEI1	Q5TIA1	1274 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	NAPRT	Q6XQN6	538 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	LAPTM4B	Q86VI4	370 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	SERPINA9	Q86WD7	417 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	VSIG1	Q86XK7	387 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	LRRN4CL	Q8ND94	238 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	OR5K2	Q8NHB8	316 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	RNF25	Q96BH1	459 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	GPR137	Q96N19	417 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF285	Q96NJ3	590 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	SELENOS	Q9BQE4	189 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	APOL2	Q9BQE5	337 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF304	Q9HCX3	659 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	UVRAG	Q9P2Y5	699 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	RSPH14	Q9UHP6	348 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	DUSP10	Q9Y6W6	482 aa		11.63	□□□□□ -0.55
DDR1-267	ENST00000512336	CPAMD8	Q8IZJ3	1885 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	IGHV1-45	A0A0A0MS14	117 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	FITM1	A5D6W6	292 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	C5orf60	A6NFR6	353 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	LIN7A	O14910	233 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNHIT1	O43257	154 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	FAM155B	O75949	473 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	AP2A1	O95782	977 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ACRV1	P26436	265 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	PKLR	P30613	574 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	MC4R	P32245	332 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF140	P52738	457 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	VSX2	P58304	361 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	LONRF1	Q17RB8	773 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	FAM214A	Q32MH5	1076 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF766	Q5HY98	468 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	ABHD17B	Q5VST6	288 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	FIGLA	Q6QHK4	219 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	RIPOR1	Q6ZS17	1223 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	NEK10	Q6ZWH5	1172 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	TAX1BP1	Q86VP1	789 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	LINC01555	Q8NAE3	123 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	THAP3	Q8WTV1	239 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	SDCCAG3	Q96C92	435 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	RIC8B	Q9NVN3	520 aa		11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	STOX2	Q9P2F5	926 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-267	ENST00000512336	TRBV5-4	A0A0C4DH59	114 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336		A0A1W2PQ72	361 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	FAM221A	A4D161	298 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	IDS	B3KWA1	339 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	NPIPA5	E9PKD4	350 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	FFAR3	O14843	346 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GPR42	O15529	346 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GSTM1	P09488	218 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	MYBL2	P10244	700 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	CXCR2	P25025	360 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	DNAJA1	P31689	397 aa	Known RBP	11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	NR2C2	P49116	596 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	EMP2	P54851	167 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GEM	P55040	296 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GSTM4	Q03013	218 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	ZNF33B	Q06732	778 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GPR33	Q49SQ1	333 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	WASHC2D	Q5SRD0	308 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	MFSD7	Q6UXD7	560 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	C3P1	Q6ZMU1	363 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	BZW1	Q7L1Q6	419 aa	Known RBP	11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	HDX	Q7Z353	690 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	TGIF2LY	Q8IUE0	185 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	CREG2	Q8IUH2	290 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	AGAP11	Q8TF27	550 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	CA5BP1	Q8WTZ4	195 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	ELMO1	Q92556	727 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	NRGN	Q92686	78 aa		11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	NAP1L3	Q99457	506 aa	Predicted RBP	11.61	□□□□□ -0.55
DDR1-267	ENST00000512336	GORASP1	Q9BQQ3	440 aa		11.61	□□□□□ -0.55

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