RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SIGLEC12Q96PQ1 595 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 DMRTA2Q96SC8 542 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 NAT10Q9H0A0 1025 aaKnown RBP18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ZNF700Q9H0M5 742 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 RIC8BQ9NVN3 520 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 HRNRQ86YZ3 2850 aaPredicted RBP18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 H7C0C1 242 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 UQCRHP07919 91 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 IGFBP2P18065 325 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 CCR7P32248 378 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 FOXN2P32314 431 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 ATP5OP48047 213 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 PRTGQ2VWP7 1150 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 DNAJC21Q5F1R6 531 aaKnown RBP18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 ABHD17BQ5VST6 288 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 ITPRIPL1Q6GPH6 555 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 PRMT9Q6P2P2 845 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 TMTC1Q8IUR5 882 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 SIAH3Q8IW03 269 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 KLHDC8BQ8IXV7 354 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 AGAP11Q8TF27 550 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 MIPEPQ99797 713 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 FAM118BQ9BPY3 351 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 HEMGNQ9BXL5 484 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 GPAMQ9HCL2 828 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 INTS7Q9NVH2 962 aaKnown RBP18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 PIH1D1Q9NWS0 290 aaKnown RBP18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 STMN3Q9NZ72 180 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 TRPC4Q9UBN4 977 aa18.05■□□□□ 0.48
HMGCS1-206ENST00000511774 NPIPA5E9PKD4 350 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SRPX2O60687 465 aaPredicted RBP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 EIF2S1P05198 315 aaKnown RBP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 CD99P14209 185 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 ITIH4Q14624 930 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SYT16Q17RD7 645 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 CCSMST1Q4G0I0 132 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 TMEM205Q6UW68 189 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 RNF44Q7L0R7 432 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 DOLPP1Q86YN1 238 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 BEST3Q8N1M1 668 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 MDS2Q8NDY4 140 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SUN3Q8TAQ9 357 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SLC22A18Q96BI1 424 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 NPAS2Q99743 824 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 NPDC1Q9NQX5 325 aaPredicted RBP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 KLHL1Q9NR64 748 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 SPTLC3Q9NUV7 552 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 TNFRSF10DQ9UBN6 386 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 NPIPA1Q9UND3 350 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 AAR2Q9Y312 384 aaKnown RBP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 PCDHGB6Q9Y5F9 930 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 KLK4Q9Y5K2 254 aa18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 NSD1Q96L73 2696 aaPredicted RBP18.04■□□□□ 0.48
HMGCS1-206ENST00000511774 IGHV3-20A0A0C4DH32 117 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 A0A1W2PPV9 198 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 TARM1B6A8C7 271 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 RASGRF2O14827 1237 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 SPOPO43791 374 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 MAN1A2O60476 641 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 GPC4O75487 556 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 CXCR2P25025 360 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 PSMA3P25788 255 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 SLC1A1P43005 524 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 POU6F1Q14863 301 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 KCTD11Q693B1 232 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 FBXO42Q6P3S6 717 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 BBS12Q6ZW61 710 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 DCUN1D3Q8IWE4 304 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 ZUFSPQ96AP4 578 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 SDCCAG3Q96C92 435 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 FRMD6Q96NE9 622 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 ANKRD10Q9NXR5 420 aa18.03■□□□□ 0.48
HMGCS1-206ENST00000511774 A0A0U1RQJ8 604 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 CCDC162PA2VCL2 907 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 ASPDHA6ND91 283 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 IQCF5A8MTL0 148 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 PSTPIP1O43586 416 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 KDM1AO60341 852 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 HEXBP07686 556 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 HSPA14Q0VDF9 509 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 TUBA3CQ13748 450 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 DSG2Q14126 1118 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 MUM1Q2TAK8 710 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 RNFT1Q5M7Z0 435 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 TUBA3EQ6PEY2 450 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 ZC3H7AQ8IWR0 971 aaKnown RBP18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 ARHGEF39Q8N4T4 335 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 OR2L3Q8NG85 312 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 YIPF2Q9BWQ6 316 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 GSX1Q9H4S2 264 aaPredicted RBP18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 FAM169AQ9Y6X4 670 aa18.02■□□□□ 0.48
HMGCS1-206ENST00000511774 OR2A25A4D2G3 310 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 A8MUI8 341 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 H0YGG7 62 aa18.01■□□□□ 0.47
HMGCS1-206ENST00000511774 APOC4-APOC2K7ER74 178 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms